Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm22326-201ENSMUST00000158897 351 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm26318-201ENSMUST00000176507 96 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm20794-201ENSMUST00000177626 628 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm22851-201ENSMUST00000178741 94 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm25074-201ENSMUST00000178782 94 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm26731-201ENSMUST00000180683 543 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Clrn1Q8K445 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm29045-201ENSMUST00000187278 698 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Clrn1Q8K445 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm29454-201ENSMUST00000190805 393 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm44456-201ENSMUST00000196554 89 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm43712-201ENSMUST00000198020 291 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm2011-203ENSMUST00000203750 435 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm44795-201ENSMUST00000205496 319 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm45173-201ENSMUST00000206819 305 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 AC131029.2-202ENSMUST00000228430 496 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm22572-201ENSMUST00000082985 105 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm24268-201ENSMUST00000082990 110 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Mir342-201ENSMUST00000083502 99 ntBASIC4.68□□□□□ -1.66
Clrn1Q8K445 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Clrn1Q8K445 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Clrn1Q8K445 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm13331-201ENSMUST00000117500 448 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm14359-201ENSMUST00000118883 424 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm24441-201ENSMUST00000157235 281 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm23332-201ENSMUST00000157424 275 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm25335-201ENSMUST00000158043 103 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm24944-201ENSMUST00000158330 128 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm24225-201ENSMUST00000158825 98 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm17081-201ENSMUST00000167363 478 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm22716-201ENSMUST00000177596 107 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm24418-201ENSMUST00000177597 79 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm24639-201ENSMUST00000178518 79 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm23076-201ENSMUST00000179082 79 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm25077-201ENSMUST00000179157 79 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm28141-201ENSMUST00000186676 342 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm5734-201ENSMUST00000189787 913 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm18482-201ENSMUST00000202405 760 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Clrn1Q8K445 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC4.67□□□□□ -1.66
Clrn1Q8K445 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 CT956049.1-201ENSMUST00000225671 763 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm5045-201ENSMUST00000027054 810 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Mir31-201ENSMUST00000083474 106 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Clrn1Q8K445 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.67□□□□□ -1.66
Clrn1Q8K445 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.67□□□□□ -1.66
Clrn1Q8K445 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms