Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm9587-201ENSMUST00000172449 454 ntBASIC2.9□□□□□ -1.95
Col6a6Q8C6K9 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.9□□□□□ -1.95
Col6a6Q8C6K9 Gm20773-201ENSMUST00000178940 681 ntBASIC2.9□□□□□ -1.95
Col6a6Q8C6K9 Gm26866-201ENSMUST00000180414 802 ntBASIC2.9□□□□□ -1.95
Col6a6Q8C6K9 Gm6140-201ENSMUST00000192494 966 ntBASIC2.9□□□□□ -1.95
Col6a6Q8C6K9 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC2.9□□□□□ -1.95
Col6a6Q8C6K9 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Col6a6Q8C6K9 Gm17917-201ENSMUST00000218561 953 ntBASIC2.9□□□□□ -1.95
Col6a6Q8C6K9 AC159256.1-201ENSMUST00000224298 1039 ntBASIC2.9□□□□□ -1.95
Col6a6Q8C6K9 AC192333.5-201ENSMUST00000224620 2350 ntBASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Gm37176-201ENSMUST00000193300 4051 ntBASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Gm23231-201ENSMUST00000157299 104 ntBASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Gm20656-201ENSMUST00000176925 518 ntBASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Gm6947-201ENSMUST00000186254 78 ntBASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Gm25004-201ENSMUST00000083811 161 ntBASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Gm24958-201ENSMUST00000158009 97 ntBASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Gm18342-201ENSMUST00000186987 694 ntBASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Gm8282-201ENSMUST00000187559 483 ntBASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Gm19232-201ENSMUST00000211621 652 ntBASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Gm35405-201ENSMUST00000218754 400 ntBASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC2.89□□□□□ -1.95
Col6a6Q8C6K9 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 AC122408.2-201ENSMUST00000217901 1391 ntBASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Gm44434-201ENSMUST00000203918 3745 ntBASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Gm9343-201ENSMUST00000209016 2609 ntBASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Mir5128-201ENSMUST00000175217 84 ntBASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Gm37966-201ENSMUST00000193122 326 ntBASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Gm42666-201ENSMUST00000201954 152 ntBASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Gm45498-201ENSMUST00000210346 283 ntBASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Gm13064-201ENSMUST00000119125 557 ntBASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Gm8244-201ENSMUST00000121254 264 ntBASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Mir5123-201ENSMUST00000177794 83 ntBASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Gm45733-201ENSMUST00000212988 437 ntBASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Gm22249-201ENSMUST00000082485 136 ntBASIC2.88□□□□□ -1.95
Col6a6Q8C6K9 Gm16332-201ENSMUST00000134229 2967 ntBASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Gm22674-201ENSMUST00000104413 131 ntBASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Gm14901-201ENSMUST00000119001 283 ntBASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Gm24358-201ENSMUST00000158424 288 ntBASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Gm28263-201ENSMUST00000185884 400 ntBASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Gm46138-201ENSMUST00000215294 426 ntBASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Gm7540-201ENSMUST00000219764 926 ntBASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Gm18441-201ENSMUST00000223539 617 ntBASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 AC117797.2-201ENSMUST00000224419 531 ntBASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Gm37814-201ENSMUST00000195820 3644 ntBASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Gm42909-201ENSMUST00000196982 3619 ntBASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Col6a6Q8C6K9 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 Gm12723-201ENSMUST00000120700 451 ntBASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 Gm8600-201ENSMUST00000186320 905 ntBASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 Trbv7-201ENSMUST00000193339 402 ntBASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 Gm18748-201ENSMUST00000198507 622 ntBASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 Gm42850-201ENSMUST00000202094 201 ntBASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 n-R5s182-201ENSMUST00000083889 107 ntBASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 Gm43648-201ENSMUST00000197775 2485 ntBASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Col6a6Q8C6K9 Gm26342-201ENSMUST00000104557 129 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms