Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm23269-201ENSMUST00000178701 107 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm29556-201ENSMUST00000187591 696 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm42465-201ENSMUST00000197036 492 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm44274-201ENSMUST00000203417 256 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 AC131747.1-201ENSMUST00000226159 793 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm26108-201ENSMUST00000083973 191 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Synpr-207ENSMUST00000223583 3362 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Usp40Q8BWR4 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm43188-201ENSMUST00000200180 2160 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm14793-201ENSMUST00000118739 311 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm12016-201ENSMUST00000119079 681 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm13787-201ENSMUST00000120422 168 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm5287-201ENSMUST00000120666 598 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm13555-201ENSMUST00000121668 319 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm25902-201ENSMUST00000158493 318 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm21816-201ENSMUST00000179255 360 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm17916-202ENSMUST00000187634 1187 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm43276-201ENSMUST00000199712 364 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm45192-201ENSMUST00000206749 283 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm17780-201ENSMUST00000207142 612 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm17779-201ENSMUST00000213395 394 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm24254-201ENSMUST00000083702 104 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Usp40Q8BWR4 AC154329.1-201ENSMUST00000224408 3129 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 AC122317.3-201ENSMUST00000219320 3524 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Usp40Q8BWR4 Gm19335-201ENSMUST00000195836 2069 ntBASIC6.13□□□□□ -1.43
Usp40Q8BWR4 AC144772.3-201ENSMUST00000228829 3126 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Gm32444-201ENSMUST00000195147 3511 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Gm25316-201ENSMUST00000116826 118 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Gm14001-201ENSMUST00000118847 247 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Gm5942-201ENSMUST00000120046 439 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Gm30280-201ENSMUST00000192214 262 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp40Q8BWR4 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Gm37272-201ENSMUST00000193401 488 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Gm43652-201ENSMUST00000196219 675 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Gm43441-201ENSMUST00000201458 205 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Gm45235-201ENSMUST00000208016 4465 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 AC160999.1-201ENSMUST00000225675 810 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Gm22444-201ENSMUST00000093693 108 ntBASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Usp40Q8BWR4 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usp40Q8BWR4 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm2123-201ENSMUST00000221476 2836 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 AC131743.1-201ENSMUST00000222138 4024 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm6062-201ENSMUST00000120462 631 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm11522-201ENSMUST00000120533 176 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm22453-201ENSMUST00000122801 318 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm22675-201ENSMUST00000158430 104 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm24315-201ENSMUST00000177835 127 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm25598-201ENSMUST00000179031 107 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm24969-201ENSMUST00000180331 79 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm29563-201ENSMUST00000187249 496 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm37523-201ENSMUST00000194901 412 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm37601-201ENSMUST00000194922 394 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms