Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm23750-201ENSMUST00000104222 132 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Mir1188-201ENSMUST00000116756 120 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm11221-201ENSMUST00000117230 597 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm12683-201ENSMUST00000117528 415 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm11219-201ENSMUST00000118565 358 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm12074-201ENSMUST00000120189 219 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm25339-201ENSMUST00000157458 232 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm25227-201ENSMUST00000158204 112 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm22122-201ENSMUST00000175147 200 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm5139-201ENSMUST00000175943 249 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm24407-201ENSMUST00000177864 141 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm24863-201ENSMUST00000179499 107 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Mir6417-201ENSMUST00000183815 116 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm28429-201ENSMUST00000188521 363 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm29454-201ENSMUST00000190805 393 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm18551-201ENSMUST00000195594 642 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm44330-201ENSMUST00000200106 143 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 AC160863.1-201ENSMUST00000218412 317 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm22229-201ENSMUST00000082987 108 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm22169-201ENSMUST00000083229 107 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Gm16261-201ENSMUST00000096813 205 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Sh3rf1Q69ZI1 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.4□□□□□ -1.55
Sh3rf1Q69ZI1 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.4□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sh3rf1Q69ZI1 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.4□□□□□ -1.55
Sh3rf1Q69ZI1 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.4□□□□□ -1.55
Sh3rf1Q69ZI1 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sh3rf1Q69ZI1 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sh3rf1Q69ZI1 Gm7195-201ENSMUST00000190869 1707 ntBASIC5.4□□□□□ -1.55
Sh3rf1Q69ZI1 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Sh3rf1Q69ZI1 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm12149-201ENSMUST00000117511 654 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm11971-201ENSMUST00000117715 288 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm14517-201ENSMUST00000119040 337 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm15490-201ENSMUST00000119894 387 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm11894-201ENSMUST00000121579 328 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm25846-201ENSMUST00000158013 135 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm18403-201ENSMUST00000192907 529 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Mir6994-201ENSMUST00000198985 73 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm43554-201ENSMUST00000199987 186 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm18007-201ENSMUST00000205019 844 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 AC134468.2-201ENSMUST00000222549 672 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 AC109172.1-201ENSMUST00000227503 187 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm25929-201ENSMUST00000082784 107 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm25853-201ENSMUST00000082793 132 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm24610-201ENSMUST00000083270 109 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.39□□□□□ -1.55
Sh3rf1Q69ZI1 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sh3rf1Q69ZI1 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms