Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 Gm29389-201ENSMUST00000191562 352 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim28Q62318 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim28Q62318 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim28Q62318 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.52□□□□□ -1.53
Trim28Q62318 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim28Q62318 Gm18774-201ENSMUST00000218269 601 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim28Q62318 Gm31931-201ENSMUST00000219666 222 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim28Q62318 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim28Q62318 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim28Q62318 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.52□□□□□ -1.53
Trim28Q62318 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim28Q62318 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trim28Q62318 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim28Q62318 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim28Q62318 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Trim28Q62318 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim28Q62318 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim28Q62318 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim28Q62318 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim28Q62318 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim28Q62318 Gm37936-201ENSMUST00000194647 1322 ntBASIC5.51□□□□□ -1.53
Trim28Q62318 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
Trim28Q62318 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim28Q62318 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Trim28Q62318 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim28Q62318 Gm22816-201ENSMUST00000157450 117 ntBASIC5.51□□□□□ -1.53
Trim28Q62318 Gm22945-201ENSMUST00000158557 157 ntBASIC5.51□□□□□ -1.53
Trim28Q62318 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.51□□□□□ -1.53
Trim28Q62318 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim28Q62318 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim28Q62318 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim28Q62318 Gm27190-201ENSMUST00000184890 542 ntBASIC5.51□□□□□ -1.53
Trim28Q62318 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC5.51□□□□□ -1.53
Trim28Q62318 Gm38334-201ENSMUST00000195060 313 ntBASIC5.51□□□□□ -1.53
Trim28Q62318 Gm8132-201ENSMUST00000204938 640 ntBASIC5.51□□□□□ -1.53
Trim28Q62318 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim28Q62318 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.51□□□□□ -1.53
Trim28Q62318 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim28Q62318 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim28Q62318 Gm25404-201ENSMUST00000082970 107 ntBASIC5.51□□□□□ -1.53
Trim28Q62318 Gm24765-201ENSMUST00000083691 103 ntBASIC5.51□□□□□ -1.53
Trim28Q62318 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim28Q62318 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim28Q62318 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim28Q62318 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim28Q62318 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim28Q62318 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim28Q62318 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim28Q62318 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim28Q62318 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim28Q62318 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Trim28Q62318 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 AC134917.1-201ENSMUST00000220517 1449 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Trim28Q62318 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Trim28Q62318 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim28Q62318 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Trim28Q62318 Gm13803-201ENSMUST00000117547 489 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm14282-201ENSMUST00000119484 240 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm14229-201ENSMUST00000121178 850 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm12881-201ENSMUST00000121191 203 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC5.5□□□□□ -1.53
Trim28Q62318 Gm24745-201ENSMUST00000157840 85 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm25553-201ENSMUST00000158076 79 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm24503-201ENSMUST00000158454 135 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm26402-201ENSMUST00000158499 113 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Trim28Q62318 Gm24080-201ENSMUST00000175178 232 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm23215-201ENSMUST00000178153 121 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Mir6951-201ENSMUST00000183910 75 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm28560-201ENSMUST00000186091 315 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm29259-201ENSMUST00000186396 694 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm28334-201ENSMUST00000186653 315 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm28495-201ENSMUST00000188452 315 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm29634-201ENSMUST00000188467 696 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm28232-201ENSMUST00000188683 315 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm28699-201ENSMUST00000189193 696 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm28481-201ENSMUST00000189231 315 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm29059-201ENSMUST00000191534 315 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm37765-201ENSMUST00000192395 315 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm37237-201ENSMUST00000192893 315 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm36968-201ENSMUST00000193737 315 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm38290-201ENSMUST00000195238 315 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm44403-201ENSMUST00000198554 129 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.5□□□□□ -1.53
Trim28Q62318 Gm42579-201ENSMUST00000200512 734 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Trim28Q62318 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Trim28Q62318 Gm38091-201ENSMUST00000192418 3871 ntBASIC5.5□□□□□ -1.53
Trim28Q62318 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim28Q62318 Gm45137-201ENSMUST00000208652 4415 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms