Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Mir5106-201ENSMUST00000174936 73 ntBASIC4.04□□□□□ -1.76
Sox17Q61473 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.04□□□□□ -1.76
Sox17Q61473 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.04□□□□□ -1.76
Sox17Q61473 Gm6113-201ENSMUST00000180319 639 ntBASIC4.04□□□□□ -1.76
Sox17Q61473 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Sox17Q61473 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Sox17Q61473 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Sox17Q61473 Gm37961-201ENSMUST00000192729 299 ntBASIC4.04□□□□□ -1.76
Sox17Q61473 Gm42999-201ENSMUST00000198049 786 ntBASIC4.04□□□□□ -1.76
Sox17Q61473 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.04□□□□□ -1.76
Sox17Q61473 Gm17956-201ENSMUST00000199931 838 ntBASIC4.04□□□□□ -1.76
Sox17Q61473 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC4.04□□□□□ -1.76
Sox17Q61473 Gm8774-201ENSMUST00000203621 692 ntBASIC4.04□□□□□ -1.76
Sox17Q61473 Gm18007-201ENSMUST00000205019 844 ntBASIC4.04□□□□□ -1.76
Sox17Q61473 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Sox17Q61473 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.04□□□□□ -1.76
Sox17Q61473 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Sox17Q61473 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Sox17Q61473 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Sox17Q61473 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Sox17Q61473 Gm26064-201ENSMUST00000083381 109 ntBASIC4.04□□□□□ -1.76
Sox17Q61473 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.04□□□□□ -1.76
Sox17Q61473 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Sox17Q61473 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.04□□□□□ -1.76
Sox17Q61473 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Sox17Q61473 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Sox17Q61473 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Sox17Q61473 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Sox17Q61473 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Sox17Q61473 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.04□□□□□ -1.76
Sox17Q61473 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sox17Q61473 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sox17Q61473 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Sox17Q61473 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Sox17Q61473 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
Sox17Q61473 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
Sox17Q61473 Gm22273-201ENSMUST00000104040 132 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm11876-201ENSMUST00000120002 269 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm16445-201ENSMUST00000120399 714 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm5646-201ENSMUST00000120568 714 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm13865-201ENSMUST00000120957 865 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Clec2f-201ENSMUST00000121051 374 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.03□□□□□ -1.76
Sox17Q61473 Gm7846-201ENSMUST00000145844 274 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Sox17Q61473 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Sox17Q61473 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Sox17Q61473 Gm15143-201ENSMUST00000178180 714 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Mir6971-201ENSMUST00000183497 63 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm27317-201ENSMUST00000183533 95 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm27551-201ENSMUST00000184258 77 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm27940-201ENSMUST00000184449 98 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm29332-201ENSMUST00000190829 227 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm29138-201ENSMUST00000191444 348 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm37828-201ENSMUST00000192496 432 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm44990-201ENSMUST00000203922 217 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.03□□□□□ -1.76
Sox17Q61473 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.03□□□□□ -1.76
Sox17Q61473 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Sox17Q61473 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.03□□□□□ -1.76
Sox17Q61473 Gm44765-201ENSMUST00000206927 601 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm6056-201ENSMUST00000221253 488 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 AC154552.4-201ENSMUST00000222171 151 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Sox17Q61473 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Sox17Q61473 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Sox17Q61473 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Sox17Q61473 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Sox17Q61473 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Sox17Q61473 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.03□□□□□ -1.76
Sox17Q61473 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Sox17Q61473 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Sox17Q61473 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC4.03□□□□□ -1.77
Sox17Q61473 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.02□□□□□ -1.77
Sox17Q61473 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.02□□□□□ -1.77
Sox17Q61473 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Sox17Q61473 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Sox17Q61473 Gm44527-202ENSMUST00000204519 1314 ntBASIC4.02□□□□□ -1.77
Sox17Q61473 AC124746.1-201ENSMUST00000227535 1300 ntBASIC4.02□□□□□ -1.77
Sox17Q61473 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Sox17Q61473 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Sox17Q61473 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
Sox17Q61473 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sox17Q61473 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Sox17Q61473 Gm13664-201ENSMUST00000117304 345 ntBASIC4.02□□□□□ -1.77
Sox17Q61473 Gm11869-201ENSMUST00000118701 329 ntBASIC4.02□□□□□ -1.77
Sox17Q61473 Gm11410-201ENSMUST00000120053 1143 ntBASIC4.02□□□□□ -1.77
Sox17Q61473 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC4.02□□□□□ -1.77
Sox17Q61473 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.02□□□□□ -1.77
Sox17Q61473 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC4.02□□□□□ -1.77
Sox17Q61473 Gm6969-201ENSMUST00000140065 342 ntBASIC4.02□□□□□ -1.77
Sox17Q61473 Gm2182-201ENSMUST00000145243 663 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms