Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm24240-201ENSMUST00000157785 135 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm23852-201ENSMUST00000158376 77 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm26170-201ENSMUST00000158419 148 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm6872-201ENSMUST00000165001 700 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm3242-201ENSMUST00000171273 485 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm28781-201ENSMUST00000185760 696 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm29307-201ENSMUST00000187367 696 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm29339-201ENSMUST00000189613 696 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm29407-201ENSMUST00000191468 696 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm42814-201ENSMUST00000199370 460 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm17990-201ENSMUST00000211728 553 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 AC157772.2-201ENSMUST00000228202 259 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm11221-201ENSMUST00000117230 597 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm14874-201ENSMUST00000118995 438 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm11556-201ENSMUST00000120751 288 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm24439-201ENSMUST00000157894 117 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm3470-201ENSMUST00000160819 420 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm8532-201ENSMUST00000179174 461 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Mir6343-201ENSMUST00000183584 84 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm27385-201ENSMUST00000184747 104 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm28255-201ENSMUST00000187101 694 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm28552-201ENSMUST00000190725 388 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm34176-201ENSMUST00000192621 474 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm43968-201ENSMUST00000203388 389 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm44720-201ENSMUST00000206076 260 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm44609-201ENSMUST00000207157 460 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Gm45735-201ENSMUST00000212779 319 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 CT485612.2-201ENSMUST00000223014 151 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Mir129-1-201ENSMUST00000083535 73 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 AC132852.1-201ENSMUST00000214683 2324 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Scaf1Q5U4C3 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Gm43896-201ENSMUST00000203440 2032 ntBASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Gm12683-201ENSMUST00000117528 415 ntBASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Gm16089-201ENSMUST00000117679 336 ntBASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Gm11550-201ENSMUST00000118210 699 ntBASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Gm12281-201ENSMUST00000119536 298 ntBASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Gm22480-201ENSMUST00000122568 128 ntBASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Gm25982-201ENSMUST00000157920 101 ntBASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Scarna13-201ENSMUST00000158164 275 ntBASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Gm37455-201ENSMUST00000191993 529 ntBASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Gm38076-201ENSMUST00000193889 450 ntBASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Scaf1Q5U4C3 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms