Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Ap3m1-208ENSMUST00000224016 764 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm23697-201ENSMUST00000103897 110 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm11874-201ENSMUST00000117437 130 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm11923-201ENSMUST00000118135 508 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm13501-201ENSMUST00000118477 979 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm12237-201ENSMUST00000120158 470 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm13007-201ENSMUST00000121866 365 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm23789-201ENSMUST00000122536 301 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm16331-201ENSMUST00000144274 498 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm22817-201ENSMUST00000157448 356 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm24930-201ENSMUST00000158315 83 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm24666-201ENSMUST00000158937 167 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm23215-201ENSMUST00000178153 121 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm27568-201ENSMUST00000184220 99 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm29196-201ENSMUST00000189239 618 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm29428-201ENSMUST00000190086 409 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm37599-201ENSMUST00000193067 489 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm9722-201ENSMUST00000194568 802 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm43631-201ENSMUST00000202011 369 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm44404-201ENSMUST00000203979 636 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm43897-201ENSMUST00000204019 309 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 AC153646.1-201ENSMUST00000223229 1279 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 CT025689.2-201ENSMUST00000224979 429 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 AC166574.3-201ENSMUST00000226725 367 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm25403-201ENSMUST00000082971 143 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Gm7869-201ENSMUST00000121457 1322 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.69□□□□□ -1.82
Trim40Q3UWA4 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm25097-201ENSMUST00000104042 145 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm11881-201ENSMUST00000119408 572 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm6797-201ENSMUST00000119440 512 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm15075-201ENSMUST00000122187 477 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm22818-201ENSMUST00000157446 104 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm20397-201ENSMUST00000174520 362 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Mir6393-201ENSMUST00000183709 94 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm27942-201ENSMUST00000184669 101 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm8600-201ENSMUST00000186320 905 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm37418-201ENSMUST00000195031 274 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm6064-201ENSMUST00000203999 454 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm4501-201ENSMUST00000207330 551 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm4558-201ENSMUST00000207886 521 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm4528-201ENSMUST00000207905 551 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm45409-201ENSMUST00000211486 252 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm19709-201ENSMUST00000215403 482 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Mecom-201ENSMUST00000061088 348 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm24950-201ENSMUST00000082768 191 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm23971-201ENSMUST00000083317 191 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm23849-201ENSMUST00000083833 191 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm26316-201ENSMUST00000083886 191 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms