Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm8338-201ENSMUST00000163928 363 ntBASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Gm5777-201ENSMUST00000177265 448 ntBASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Gm17929-201ENSMUST00000186851 627 ntBASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Gm9443-201ENSMUST00000188406 816 ntBASIC4.7□□□□□ -1.66
Usp39Q3TIX9 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Gm17775-201ENSMUST00000198542 258 ntBASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Gm32453-201ENSMUST00000204183 456 ntBASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Gm45366-201ENSMUST00000209828 384 ntBASIC4.7□□□□□ -1.66
Usp39Q3TIX9 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.7□□□□□ -1.66
Usp39Q3TIX9 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Gm26176-201ENSMUST00000083795 105 ntBASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Gm22350-201ENSMUST00000083924 156 ntBASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Usp39Q3TIX9 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm12016-201ENSMUST00000119079 681 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm22870-201ENSMUST00000157501 112 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm25163-201ENSMUST00000158905 104 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm21809-201ENSMUST00000178495 468 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm17412-201ENSMUST00000179261 468 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm9320-201ENSMUST00000184151 473 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm28016-201ENSMUST00000184594 196 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm2497-201ENSMUST00000189539 601 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm28389-201ENSMUST00000190090 697 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm5842-201ENSMUST00000195073 622 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm2628-201ENSMUST00000218019 426 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.69□□□□□ -1.66
Usp39Q3TIX9 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm13340-201ENSMUST00000117219 1545 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms