Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Gm45066-201ENSMUST00000207528 2551 ntBASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Gm7855-201ENSMUST00000137737 687 ntBASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Gm29563-201ENSMUST00000187249 496 ntBASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Gm43036-201ENSMUST00000200594 373 ntBASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Gm17820-201ENSMUST00000220213 1068 ntBASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Gm10484-201ENSMUST00000196372 4759 ntBASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Gm23551-201ENSMUST00000116852 121 ntBASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Gm14880-201ENSMUST00000117581 292 ntBASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Gm13386-201ENSMUST00000117677 124 ntBASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Gm11896-201ENSMUST00000121105 820 ntBASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Gm25528-201ENSMUST00000180264 132 ntBASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC1.75□□□□□ -2.13
Ush2AQ2QI47 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Ush2AQ2QI47 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Mir466k-201ENSMUST00000116774 122 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm25290-201ENSMUST00000122796 144 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm44675-201ENSMUST00000208188 2927 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm25068-201ENSMUST00000103895 110 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm23911-201ENSMUST00000104596 134 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm9208-201ENSMUST00000120468 948 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm24075-201ENSMUST00000158175 72 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm13692-201ENSMUST00000120774 371 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm9850-201ENSMUST00000117916 227 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm24059-201ENSMUST00000157493 312 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm3489-201ENSMUST00000190083 528 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm42694-201ENSMUST00000196951 358 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm45382-201ENSMUST00000210607 151 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm45879-201ENSMUST00000212521 392 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm25130-201ENSMUST00000082650 156 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Cmah-208ENSMUST00000224819 9482 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Gm38699-201ENSMUST00000221301 1740 ntBASIC1.74□□□□□ -2.13
Ush2AQ2QI47 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Gm11905-201ENSMUST00000117653 678 ntBASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Gm16445-201ENSMUST00000120399 714 ntBASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Gm19739-201ENSMUST00000195941 153 ntBASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Gm43722-201ENSMUST00000196054 124 ntBASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Gm43975-201ENSMUST00000203023 481 ntBASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Gm6064-201ENSMUST00000203999 454 ntBASIC1.73□□□□□ -2.13
Ush2AQ2QI47 AC119573.1-201ENSMUST00000227960 757 ntBASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Gm38211-201ENSMUST00000192814 7217 ntBASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Gm44846-201ENSMUST00000207127 3243 ntBASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Gm37747-201ENSMUST00000193717 4003 ntBASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Ush2AQ2QI47 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms