Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm14577-201ENSMUST00000121134 256 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Sox9Q04887 Gm24477-201ENSMUST00000157438 103 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Gm15796-201ENSMUST00000162135 204 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Gm20462-201ENSMUST00000172623 408 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Gm23648-201ENSMUST00000180301 107 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Gm26828-201ENSMUST00000180640 172 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Mir6541-201ENSMUST00000183649 110 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sox9Q04887 Gm28843-201ENSMUST00000189198 678 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Gm29546-201ENSMUST00000191171 678 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Sox9Q04887 Gm42999-201ENSMUST00000198049 786 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Gm5034-201ENSMUST00000199115 634 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Gm43505-201ENSMUST00000200579 139 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Sox9Q04887 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.13□□□□□ -1.59
Sox9Q04887 CT009713.9-201ENSMUST00000223604 389 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 CT030135.1-201ENSMUST00000223760 570 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 CT030704.1-201ENSMUST00000227521 699 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sox9Q04887 Olfr1193-201ENSMUST00000081697 957 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Gm23506-201ENSMUST00000083077 107 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Gm23733-201ENSMUST00000083750 106 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sox9Q04887 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Sox9Q04887 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Sox9Q04887 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Sox9Q04887 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sox9Q04887 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Sox9Q04887 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.13□□□□□ -1.59
Sox9Q04887 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Sox9Q04887 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Sox9Q04887 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sox9Q04887 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Sox9Q04887 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sox9Q04887 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Sox9Q04887 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.12□□□□□ -1.59
Sox9Q04887 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sox9Q04887 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.12□□□□□ -1.59
Sox9Q04887 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sox9Q04887 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sox9Q04887 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Gm22473-201ENSMUST00000104114 132 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Mir883a-201ENSMUST00000104824 76 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Gm14197-201ENSMUST00000117480 1049 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Gm12683-201ENSMUST00000117528 415 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Gm13973-201ENSMUST00000121371 894 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.12□□□□□ -1.59
Sox9Q04887 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC5.12□□□□□ -1.59
Sox9Q04887 Gm22819-201ENSMUST00000157445 303 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Gm24901-201ENSMUST00000158125 110 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Gm3030-201ENSMUST00000163410 516 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Gm6486-201ENSMUST00000166202 434 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.12□□□□□ -1.59
Sox9Q04887 Gm9613-201ENSMUST00000171662 196 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Gm19203-201ENSMUST00000174049 939 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Mir6344-201ENSMUST00000183462 104 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC5.12□□□□□ -1.59
Sox9Q04887 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Sox9Q04887 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sox9Q04887 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sox9Q04887 Gm37097-201ENSMUST00000193676 336 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC5.12□□□□□ -1.59
Sox9Q04887 Gm43026-201ENSMUST00000202972 325 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Gm44125-201ENSMUST00000203068 448 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.12□□□□□ -1.59
Sox9Q04887 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC5.12□□□□□ -1.59
Sox9Q04887 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC5.12□□□□□ -1.59
Sox9Q04887 Gm45007-201ENSMUST00000206237 366 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Gm45081-201ENSMUST00000206281 572 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Sox9Q04887 Gm3690-201ENSMUST00000211341 262 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.12□□□□□ -1.59
Sox9Q04887 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Sox9Q04887 AC139376.1-201ENSMUST00000220056 1250 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Snora52-201ENSMUST00000082732 137 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sox9Q04887 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Sox9Q04887 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sox9Q04887 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Sox9Q04887 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Sox9Q04887 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sox9Q04887 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.12□□□□□ -1.59
Sox9Q04887 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sox9Q04887 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sox9Q04887 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Sox9Q04887 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sox9Q04887 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
Sox9Q04887 Gm38212-201ENSMUST00000194081 2756 ntBASIC5.11□□□□□ -1.59
Sox9Q04887 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Sox9Q04887 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.11□□□□□ -1.59
Sox9Q04887 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms