Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm13737-201ENSMUST00000119793 232 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm17014-201ENSMUST00000120765 168 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm25827-201ENSMUST00000157089 107 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm23465-201ENSMUST00000157134 262 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm25224-201ENSMUST00000158195 68 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm15900-201ENSMUST00000161584 342 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Ear-ps3-201ENSMUST00000168308 445 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Col6a1Q04857 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm22584-201ENSMUST00000177935 92 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm27611-201ENSMUST00000184690 108 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm28666-201ENSMUST00000186649 274 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm37670-201ENSMUST00000193622 229 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm36985-201ENSMUST00000195595 379 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm8319-201ENSMUST00000205708 641 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm8672-201ENSMUST00000221200 332 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm7808-201ENSMUST00000082002 387 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm24610-201ENSMUST00000083270 109 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Olfr575-201ENSMUST00000084812 957 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a1Q04857 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.71□□□□□ -1.5
Col6a1Q04857 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.71□□□□□ -1.5
Col6a1Q04857 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a1Q04857 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a1Q04857 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Col6a1Q04857 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col6a1Q04857 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Col6a1Q04857 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col6a1Q04857 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a1Q04857 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Col6a1Q04857 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm23193-201ENSMUST00000102427 82 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm14681-201ENSMUST00000118047 411 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm14594-201ENSMUST00000118052 537 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm8145-201ENSMUST00000118220 745 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm14590-201ENSMUST00000118934 537 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm14731-201ENSMUST00000119216 376 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm14655-201ENSMUST00000120124 578 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm26085-201ENSMUST00000157900 116 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm24905-201ENSMUST00000158129 104 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a1Q04857 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm26426-201ENSMUST00000177866 123 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm22367-201ENSMUST00000178930 132 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm26060-201ENSMUST00000180094 123 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm14596-201ENSMUST00000180268 537 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm14595-201ENSMUST00000180335 537 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm23925-202ENSMUST00000188429 132 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm37503-201ENSMUST00000192088 319 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm33973-201ENSMUST00000195148 534 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm37445-201ENSMUST00000195318 242 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm8747-201ENSMUST00000195392 751 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm43115-201ENSMUST00000196244 160 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm43418-201ENSMUST00000201334 428 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm43441-201ENSMUST00000201458 205 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm44041-201ENSMUST00000203678 396 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm32453-201ENSMUST00000204183 456 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm45590-201ENSMUST00000209715 262 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm7128-201ENSMUST00000211639 533 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm45814-201ENSMUST00000212646 775 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 AC132437.1-201ENSMUST00000218308 320 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm8231-201ENSMUST00000221617 783 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm26206-201ENSMUST00000082908 110 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Gm8675-201ENSMUST00000201408 1856 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 AC120375.2-201ENSMUST00000226532 1853 ntBASIC5.7□□□□□ -1.5
Col6a1Q04857 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Col6a1Q04857 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col6a1Q04857 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a1Q04857 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a1Q04857 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a1Q04857 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a1Q04857 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Col6a1Q04857 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a1Q04857 Fus-202ENSMUST00000079045 2623 ntBASIC5.69□□□□□ -1.5
Col6a1Q04857 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Col6a1Q04857 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms