Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msx2Q03358 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Msx2Q03358 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
Msx2Q03358 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Msx2Q03358 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Msx2Q03358 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Msx2Q03358 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Msx2Q03358 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
Msx2Q03358 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Msx2Q03358 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Msx2Q03358 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Msx2Q03358 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Msx2Q03358 Gm22374-201ENSMUST00000104583 132 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Gm14772-201ENSMUST00000116562 514 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Gm12231-201ENSMUST00000119447 695 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Gm15493-201ENSMUST00000119461 528 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC5.03□□□□□ -1.6
Msx2Q03358 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC5.03□□□□□ -1.6
Msx2Q03358 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Msx2Q03358 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC5.03□□□□□ -1.6
Msx2Q03358 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.03□□□□□ -1.6
Msx2Q03358 Gm23964-201ENSMUST00000157966 107 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.03□□□□□ -1.6
Msx2Q03358 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Msx2Q03358 Gm6632-201ENSMUST00000168425 954 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Gm8807-201ENSMUST00000179328 492 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Gm24957-201ENSMUST00000179604 132 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Gm28283-201ENSMUST00000185509 178 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Gm28506-201ENSMUST00000189937 150 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.03□□□□□ -1.6
Msx2Q03358 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.03□□□□□ -1.6
Msx2Q03358 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Msx2Q03358 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Gm18467-201ENSMUST00000208805 434 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.03□□□□□ -1.6
Msx2Q03358 Gm18507-201ENSMUST00000218855 525 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 CT485612.2-201ENSMUST00000223014 151 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Msx2Q03358 Gm23678-201ENSMUST00000083157 107 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Gm23461-201ENSMUST00000083265 107 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Msx2Q03358 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Msx2Q03358 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Msx2Q03358 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.03□□□□□ -1.6
Msx2Q03358 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Msx2Q03358 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Msx2Q03358 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Msx2Q03358 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Msx2Q03358 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.03□□□□□ -1.6
Msx2Q03358 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Msx2Q03358 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.02□□□□□ -1.61
Msx2Q03358 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Msx2Q03358 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Msx2Q03358 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Msx2Q03358 Gm22953-201ENSMUST00000116724 101 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Gm11313-201ENSMUST00000118779 432 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Gm5384-201ENSMUST00000120313 463 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Msx2Q03358 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Msx2Q03358 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC5.02□□□□□ -1.61
Msx2Q03358 Gm23179-201ENSMUST00000158693 304 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Gm10177-201ENSMUST00000160052 444 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Gm20545-201ENSMUST00000174739 210 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Gm29332-201ENSMUST00000190829 227 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Gm28640-201ENSMUST00000190918 550 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Gm45150-201ENSMUST00000206051 467 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.02□□□□□ -1.61
Msx2Q03358 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Gm5750-201ENSMUST00000218711 801 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.02□□□□□ -1.61
Msx2Q03358 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC5.02□□□□□ -1.61
Msx2Q03358 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Msx2Q03358 Gm23508-201ENSMUST00000083079 72 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.02□□□□□ -1.61
Msx2Q03358 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.02□□□□□ -1.61
Msx2Q03358 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Msx2Q03358 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.02□□□□□ -1.61
Msx2Q03358 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Msx2Q03358 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Msx2Q03358 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Msx2Q03358 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Msx2Q03358 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Msx2Q03358 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.01□□□□□ -1.61
Msx2Q03358 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.01□□□□□ -1.61
Msx2Q03358 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Msx2Q03358 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.01□□□□□ -1.61
Msx2Q03358 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Msx2Q03358 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
Msx2Q03358 Mir879-201ENSMUST00000104703 76 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms