Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 Gm23385-201ENSMUST00000158592 295 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cdh11P55288 Gm17085-201ENSMUST00000165425 502 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 Gm17154-201ENSMUST00000165748 431 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cdh11P55288 Gm6113-201ENSMUST00000180319 639 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cdh11P55288 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cdh11P55288 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdh11P55288 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cdh11P55288 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdh11P55288 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 Gm8939-201ENSMUST00000192577 964 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 Gm42958-201ENSMUST00000197595 318 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 Gm45458-201ENSMUST00000209900 522 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 Gm45434-201ENSMUST00000210550 293 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 Gm18320-201ENSMUST00000211304 595 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cdh11P55288 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cdh11P55288 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdh11P55288 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdh11P55288 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdh11P55288 AC119241.1-201ENSMUST00000223651 534 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 CT030705.1-201ENSMUST00000223971 533 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC3.81□□□□□ -1.8
Cdh11P55288 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
Cdh11P55288 Gm25582-201ENSMUST00000083412 110 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cdh11P55288 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Cdh11P55288 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.81□□□□□ -1.8
Cdh11P55288 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdh11P55288 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdh11P55288 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdh11P55288 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh11P55288 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
Cdh11P55288 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 Gm8757-201ENSMUST00000119660 372 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 Gm12190-201ENSMUST00000120001 187 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 Gm5060-201ENSMUST00000120072 599 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 Amd-ps1-201ENSMUST00000120127 994 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 Gm11407-201ENSMUST00000120362 1058 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC3.8□□□□□ -1.8
Cdh11P55288 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh11P55288 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.8□□□□□ -1.8
Cdh11P55288 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC3.8□□□□□ -1.8
Cdh11P55288 Gm25427-201ENSMUST00000157605 103 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
Cdh11P55288 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh11P55288 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdh11P55288 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 Gm37050-201ENSMUST00000193464 466 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 Gm44634-201ENSMUST00000206119 152 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC3.8□□□□□ -1.8
Cdh11P55288 AC069561.3-201ENSMUST00000217321 114 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.8□□□□□ -1.8
Cdh11P55288 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.8□□□□□ -1.8
Cdh11P55288 CT009550.5-201ENSMUST00000226286 382 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdh11P55288 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdh11P55288 Gm26449-201ENSMUST00000082452 104 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 Gm25699-201ENSMUST00000082896 167 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 Mir383-201ENSMUST00000083523 70 ntBASIC3.8□□□□□ -1.8
Cdh11P55288 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdh11P55288 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Cdh11P55288 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdh11P55288 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh11P55288 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh11P55288 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdh11P55288 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cdh11P55288 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Cdh11P55288 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdh11P55288 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.79□□□□□ -1.8
Cdh11P55288 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdh11P55288 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.79□□□□□ -1.8
Cdh11P55288 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cdh11P55288 Gm23431-201ENSMUST00000104006 107 ntBASIC3.79□□□□□ -1.8
Cdh11P55288 Gm26367-201ENSMUST00000104165 132 ntBASIC3.79□□□□□ -1.8
Cdh11P55288 Gm23481-201ENSMUST00000104173 131 ntBASIC3.79□□□□□ -1.8
Cdh11P55288 Gm24067-201ENSMUST00000104514 85 ntBASIC3.79□□□□□ -1.8
Cdh11P55288 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.79□□□□□ -1.8
Cdh11P55288 Gm23178-201ENSMUST00000116782 95 ntBASIC3.79□□□□□ -1.8
Cdh11P55288 Gm11432-201ENSMUST00000117334 231 ntBASIC3.79□□□□□ -1.8
Cdh11P55288 Gm13640-201ENSMUST00000118445 264 ntBASIC3.79□□□□□ -1.8
Cdh11P55288 Gm9308-201ENSMUST00000119073 448 ntBASIC3.79□□□□□ -1.8
Cdh11P55288 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.79□□□□□ -1.8
Cdh11P55288 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Cdh11P55288 Gm16250-201ENSMUST00000148974 256 ntBASIC3.79□□□□□ -1.8
Cdh11P55288 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.79□□□□□ -1.8
Cdh11P55288 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms