Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.67□□□□□ -1.82
Sox3P53784 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.67□□□□□ -1.82
Sox3P53784 AC159293.2-201ENSMUST00000222289 424 ntBASIC3.67□□□□□ -1.82
Sox3P53784 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Sox3P53784 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Sox3P53784 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Sox3P53784 Gm23297-201ENSMUST00000083184 127 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Gm25481-201ENSMUST00000083221 158 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Sox3P53784 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Sox3P53784 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Sox3P53784 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Sox3P53784 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Sox3P53784 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Sox3P53784 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.67□□□□□ -1.82
Sox3P53784 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Sox3P53784 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sox3P53784 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sox3P53784 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Sox3P53784 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sox3P53784 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Sox3P53784 Gm24715-201ENSMUST00000102377 95 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Gm23532-201ENSMUST00000104569 112 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sox3P53784 Gm13268-201ENSMUST00000117485 433 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Gm15377-201ENSMUST00000119594 246 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Gm13080-201ENSMUST00000120556 420 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Mup-ps15-201ENSMUST00000121741 539 ntBASIC3.66□□□□□ -1.82
Sox3P53784 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sox3P53784 Gm23957-201ENSMUST00000157209 90 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Gm26028-201ENSMUST00000158660 294 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Gm3470-201ENSMUST00000160819 420 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Sox3P53784 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.66□□□□□ -1.82
Sox3P53784 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Sox3P53784 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sox3P53784 Gm44513-201ENSMUST00000206811 439 ntBASIC3.66□□□□□ -1.82
Sox3P53784 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC3.66□□□□□ -1.82
Sox3P53784 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.66□□□□□ -1.82
Sox3P53784 Gm19599-201ENSMUST00000218898 358 ntBASIC3.66□□□□□ -1.82
Sox3P53784 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Platr25-208ENSMUST00000222602 939 ntBASIC3.66□□□□□ -1.82
Sox3P53784 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.66□□□□□ -1.82
Sox3P53784 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.66□□□□□ -1.82
Sox3P53784 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sox3P53784 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sox3P53784 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.66□□□□□ -1.82
Sox3P53784 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sox3P53784 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Sox3P53784 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.65□□□□□ -1.82
Sox3P53784 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
Sox3P53784 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Sox3P53784 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sox3P53784 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
Sox3P53784 Gm13076-201ENSMUST00000118041 204 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Gm14800-201ENSMUST00000122084 1272 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Gm23753-201ENSMUST00000157575 149 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Gm24965-201ENSMUST00000157922 106 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Gm2389-201ENSMUST00000160487 189 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.65□□□□□ -1.83
Sox3P53784 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.65□□□□□ -1.83
Sox3P53784 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Sox3P53784 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sox3P53784 Mir7050-201ENSMUST00000184636 60 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Gm27190-201ENSMUST00000184890 542 ntBASIC3.65□□□□□ -1.83
Sox3P53784 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Sox3P53784 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Gm36259-201ENSMUST00000197340 392 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Gm4644-201ENSMUST00000197587 400 ntBASIC3.65□□□□□ -1.83
Sox3P53784 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Mir7682-201ENSMUST00000198467 58 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Gm44118-201ENSMUST00000204665 229 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Gm44521-201ENSMUST00000206469 217 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.65□□□□□ -1.83
Sox3P53784 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Sox3P53784 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Sox3P53784 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.65□□□□□ -1.83
Sox3P53784 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.65□□□□□ -1.83
Sox3P53784 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Sox3P53784 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.65□□□□□ -1.83
Sox3P53784 Gm3829-201ENSMUST00000222362 619 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Gm3565-201ENSMUST00000222670 609 ntBASIC3.65□□□□□ -1.83
Sox3P53784 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sox3P53784 Gm25800-201ENSMUST00000082636 134 ntBASIC3.65□□□□□ -1.83
Sox3P53784 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Sox3P53784 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms