Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox1P53783 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox1P53783 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sox1P53783 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sox1P53783 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sox1P53783 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sox1P53783 Gm24403-201ENSMUST00000104616 130 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm14382-201ENSMUST00000117374 437 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm12149-201ENSMUST00000117511 654 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm15772-201ENSMUST00000118533 438 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm14359-201ENSMUST00000118883 424 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm14915-201ENSMUST00000120747 204 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm14845-201ENSMUST00000121259 306 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm23837-201ENSMUST00000122656 286 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sox1P53783 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sox1P53783 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC5.49□□□□□ -1.53
Sox1P53783 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC5.49□□□□□ -1.53
Sox1P53783 Gm43405-201ENSMUST00000198642 337 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm7721-201ENSMUST00000200446 546 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm45105-201ENSMUST00000207824 397 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm19921-201ENSMUST00000210505 703 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC5.49□□□□□ -1.53
Sox1P53783 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm20734-201ENSMUST00000216939 193 ntBASIC5.49□□□□□ -1.53
Sox1P53783 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm7822-201ENSMUST00000222433 581 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm9512-201ENSMUST00000223112 497 ntBASIC5.49□□□□□ -1.53
Sox1P53783 AL606472.1-201ENSMUST00000224628 275 ntBASIC5.49□□□□□ -1.53
Sox1P53783 AC158142.2-201ENSMUST00000227892 635 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sox1P53783 Gm23406-201ENSMUST00000082537 122 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm23447-201ENSMUST00000082798 163 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox1P53783 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.49□□□□□ -1.53
Sox1P53783 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Sox1P53783 Naip3-201ENSMUST00000118082 4208 ntBASIC5.49□□□□□ -1.53
Sox1P53783 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.49□□□□□ -1.53
Sox1P53783 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sox1P53783 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox1P53783 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sox1P53783 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Sox1P53783 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sox1P53783 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox1P53783 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sox1P53783 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox1P53783 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox1P53783 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox1P53783 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox1P53783 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sox1P53783 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox1P53783 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox1P53783 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Sox1P53783 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sox1P53783 Gm14669-201ENSMUST00000118841 250 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Gm12872-201ENSMUST00000121835 320 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Gm7840-201ENSMUST00000122086 533 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.48□□□□□ -1.53
Sox1P53783 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Gm21726-201ENSMUST00000179654 392 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
Sox1P53783 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC5.48□□□□□ -1.53
Sox1P53783 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Sox1P53783 Gm28781-201ENSMUST00000185760 696 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Gm29307-201ENSMUST00000187367 696 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Gm29339-201ENSMUST00000189613 696 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Gm29407-201ENSMUST00000191468 696 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Sox1P53783 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC5.48□□□□□ -1.53
Sox1P53783 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.48□□□□□ -1.53
Sox1P53783 Gm38098-201ENSMUST00000194115 241 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Gm32447-201ENSMUST00000194265 697 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Gm18427-201ENSMUST00000195422 515 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Gm17954-201ENSMUST00000195893 607 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Gm43779-201ENSMUST00000196691 829 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Gm43144-201ENSMUST00000198256 485 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Gm18482-201ENSMUST00000202405 760 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Gm29793-201ENSMUST00000202874 460 ntBASIC5.48□□□□□ -1.53
Sox1P53783 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox1P53783 Gm9068-201ENSMUST00000217393 455 ntBASIC5.48□□□□□ -1.53
Sox1P53783 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.48□□□□□ -1.53
Sox1P53783 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox1P53783 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sox1P53783 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox1P53783 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox1P53783 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox1P53783 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.48□□□□□ -1.53
Sox1P53783 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
Sox1P53783 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sox1P53783 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox1P53783 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox1P53783 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox1P53783 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox1P53783 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms