Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cux1P53564 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Cux1P53564 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cux1P53564 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cux1P53564 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cux1P53564 Gm12568-201ENSMUST00000117362 624 ntBASIC4.99□□□□□ -1.61
Cux1P53564 Gm12261-201ENSMUST00000117499 645 ntBASIC4.99□□□□□ -1.61
Cux1P53564 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.99□□□□□ -1.61
Cux1P53564 Gm13379-201ENSMUST00000118053 621 ntBASIC4.99□□□□□ -1.61
Cux1P53564 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.99□□□□□ -1.61
Cux1P53564 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.99□□□□□ -1.61
Cux1P53564 Gm26477-201ENSMUST00000122617 323 ntBASIC4.99□□□□□ -1.61
Cux1P53564 Gm10075-201ENSMUST00000162030 545 ntBASIC4.99□□□□□ -1.61
Cux1P53564 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.99□□□□□ -1.61
Cux1P53564 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
Cux1P53564 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.99□□□□□ -1.61
Cux1P53564 Gm8319-201ENSMUST00000205708 641 ntBASIC4.99□□□□□ -1.61
Cux1P53564 Gm6841-201ENSMUST00000220602 598 ntBASIC4.99□□□□□ -1.61
Cux1P53564 CT030704.1-201ENSMUST00000227521 699 ntBASIC4.99□□□□□ -1.61
Cux1P53564 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cux1P53564 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cux1P53564 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cux1P53564 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cux1P53564 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cux1P53564 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cux1P53564 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cux1P53564 AC192333.5-201ENSMUST00000224620 2350 ntBASIC4.99□□□□□ -1.61
Cux1P53564 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cux1P53564 Gm13167-201ENSMUST00000118554 578 ntBASIC4.98□□□□□ -1.61
Cux1P53564 Gm26214-201ENSMUST00000158581 107 ntBASIC4.98□□□□□ -1.61
Cux1P53564 Gm44253-201ENSMUST00000203387 628 ntBASIC4.98□□□□□ -1.61
Cux1P53564 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Cux1P53564 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cux1P53564 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.98□□□□□ -1.61
Cux1P53564 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Cux1P53564 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.98□□□□□ -1.61
Cux1P53564 Gm6982-201ENSMUST00000118752 1560 ntBASIC4.97□□□□□ -1.61
Cux1P53564 Gm14463-201ENSMUST00000121117 498 ntBASIC4.97□□□□□ -1.61
Cux1P53564 Mir1903-201ENSMUST00000122574 80 ntBASIC4.97□□□□□ -1.61
Cux1P53564 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.97□□□□□ -1.61
Cux1P53564 Gm18560-201ENSMUST00000173463 1123 ntBASIC4.97□□□□□ -1.61
Cux1P53564 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC4.97□□□□□ -1.61
Cux1P53564 Gm27532-201ENSMUST00000183726 113 ntBASIC4.97□□□□□ -1.61
Cux1P53564 Gm29218-205ENSMUST00000190846 615 ntBASIC4.97□□□□□ -1.61
Cux1P53564 Gm45269-201ENSMUST00000210359 282 ntBASIC4.97□□□□□ -1.61
Cux1P53564 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Cux1P53564 Gm42446-201ENSMUST00000199783 3284 ntBASIC4.97□□□□□ -1.61
Cux1P53564 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cux1P53564 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cux1P53564 Gm24068-201ENSMUST00000104513 132 ntBASIC4.97□□□□□ -1.61
Cux1P53564 Gm11229-201ENSMUST00000121993 437 ntBASIC4.97□□□□□ -1.61
Cux1P53564 Gm24720-201ENSMUST00000157518 166 ntBASIC4.97□□□□□ -1.61
Cux1P53564 Gm7281-201ENSMUST00000160010 543 ntBASIC4.97□□□□□ -1.61
Cux1P53564 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.97□□□□□ -1.61
Cux1P53564 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.97□□□□□ -1.61
Cux1P53564 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC4.97□□□□□ -1.61
Cux1P53564 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cux1P53564 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Cux1P53564 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Cux1P53564 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.61
Cux1P53564 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
Cux1P53564 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
Cux1P53564 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.96□□□□□ -1.62
Cux1P53564 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC4.96□□□□□ -1.62
Cux1P53564 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.96□□□□□ -1.62
Cux1P53564 AC117797.2-201ENSMUST00000224419 531 ntBASIC4.96□□□□□ -1.62
Cux1P53564 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Cux1P53564 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.96□□□□□ -1.62
Cux1P53564 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Cux1P53564 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Cux1P53564 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Cux1P53564 Gm22011-201ENSMUST00000158790 123 ntBASIC4.95□□□□□ -1.62
Cux1P53564 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.95□□□□□ -1.62
Cux1P53564 Gm27308-201ENSMUST00000184807 233 ntBASIC4.95□□□□□ -1.62
Cux1P53564 Gm28339-201ENSMUST00000185845 696 ntBASIC4.95□□□□□ -1.62
Cux1P53564 Gm28803-201ENSMUST00000190385 764 ntBASIC4.95□□□□□ -1.62
Cux1P53564 Gm44016-201ENSMUST00000203463 164 ntBASIC4.95□□□□□ -1.62
Cux1P53564 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC4.95□□□□□ -1.62
Cux1P53564 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC4.95□□□□□ -1.62
Cux1P53564 Gm25004-201ENSMUST00000083811 161 ntBASIC4.95□□□□□ -1.62
Cux1P53564 Gm10242-201ENSMUST00000090064 330 ntBASIC4.95□□□□□ -1.62
Cux1P53564 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.95□□□□□ -1.62
Cux1P53564 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Cux1P53564 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Cux1P53564 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Cux1P53564 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Cux1P53564 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cux1P53564 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cux1P53564 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC4.94□□□□□ -1.62
Cux1P53564 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.94□□□□□ -1.62
Cux1P53564 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.94□□□□□ -1.62
Cux1P53564 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
Cux1P53564 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Cux1P53564 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC4.94□□□□□ -1.62
Cux1P53564 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Cux1P53564 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Cux1P53564 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cux1P53564 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cux1P53564 Gm18337-201ENSMUST00000219023 5762 ntBASIC4.94□□□□□ -1.62
Cux1P53564 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms