Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.09□□□□□ -1.91
Sdc1P18828 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Sdc1P18828 Gm13228-201ENSMUST00000118937 634 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Mup-ps18-201ENSMUST00000120145 531 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm11692-201ENSMUST00000122121 902 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Sdc1P18828 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.09□□□□□ -1.91
Sdc1P18828 Gm5353-201ENSMUST00000139800 793 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm22219-201ENSMUST00000157562 319 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm16026-202ENSMUST00000159695 772 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.09□□□□□ -1.91
Sdc1P18828 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC3.09□□□□□ -1.91
Sdc1P18828 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm22392-201ENSMUST00000177971 107 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm26933-201ENSMUST00000182320 827 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm20574-201ENSMUST00000182867 917 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm27849-201ENSMUST00000183673 125 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm27828-201ENSMUST00000184108 119 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC3.09□□□□□ -1.91
Sdc1P18828 Gm29428-201ENSMUST00000190086 409 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm29454-201ENSMUST00000190805 393 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm17790-201ENSMUST00000191545 1228 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm37005-201ENSMUST00000193281 1164 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Igkv2-107-201ENSMUST00000196000 313 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm43704-201ENSMUST00000196164 496 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm17935-201ENSMUST00000196649 772 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm43116-201ENSMUST00000199789 195 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm43415-201ENSMUST00000201934 750 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC3.09□□□□□ -1.91
Sdc1P18828 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Sdc1P18828 Gm5322-201ENSMUST00000206142 699 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm44871-201ENSMUST00000207821 497 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Sdc1P18828 AC138284.5-201ENSMUST00000214389 652 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Sdc1P18828 Gm25699-201ENSMUST00000082896 167 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Mir30e-201ENSMUST00000083475 92 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm10212-201ENSMUST00000087884 324 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Sdc1P18828 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
Sdc1P18828 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.09□□□□□ -1.92
Sdc1P18828 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.09□□□□□ -1.92
Sdc1P18828 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Sdc1P18828 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Sdc1P18828 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Sdc1P18828 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Sdc1P18828 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Sdc1P18828 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Sdc1P18828 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Sdc1P18828 Gm24951-201ENSMUST00000102182 109 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Sdc1P18828 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm15752-201ENSMUST00000117427 394 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm12520-201ENSMUST00000117493 316 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm12173-201ENSMUST00000117622 273 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm12515-201ENSMUST00000120116 361 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC3.08□□□□□ -1.92
Sdc1P18828 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC3.08□□□□□ -1.92
Sdc1P18828 Gm16363-201ENSMUST00000132460 877 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.08□□□□□ -1.92
Sdc1P18828 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.08□□□□□ -1.92
Sdc1P18828 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.08□□□□□ -1.92
Sdc1P18828 Gm24188-201ENSMUST00000157980 108 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm26034-201ENSMUST00000158154 116 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm23257-201ENSMUST00000158322 132 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm23312-201ENSMUST00000158774 102 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Sdc1P18828 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Sdc1P18828 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.08□□□□□ -1.92
Sdc1P18828 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.08□□□□□ -1.92
Sdc1P18828 Gm10925-201ENSMUST00000189941 678 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm17981-201ENSMUST00000191109 739 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm37501-201ENSMUST00000192830 691 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Igkv12-66-201ENSMUST00000199305 348 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm18194-201ENSMUST00000210455 481 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.08□□□□□ -1.92
Sdc1P18828 AC125543.1-201ENSMUST00000222778 101 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 AC119241.1-201ENSMUST00000223651 534 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Sdc1P18828 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Sdc1P18828 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Sdc1P18828 Gm22220-201ENSMUST00000082671 149 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 AC120153.1-201ENSMUST00000226502 1311 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Sdc1P18828 Gm26814-201ENSMUST00000181178 4149 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.08□□□□□ -1.92
Sdc1P18828 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Sdc1P18828 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Sdc1P18828 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Sdc1P18828 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms