Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm5963-201ENSMUST00000143451 236 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 Gm24224-201ENSMUST00000158828 258 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Cdx1P18111 Gm19503-201ENSMUST00000187109 241 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.27□□□□□ -1.89
Cdx1P18111 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.27□□□□□ -1.89
Cdx1P18111 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.27□□□□□ -1.89
Cdx1P18111 Gm9541-201ENSMUST00000188409 502 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 Gm8242-202ENSMUST00000193056 475 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Cdx1P18111 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.27□□□□□ -1.89
Cdx1P18111 Gm43239-201ENSMUST00000200131 201 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 Gm44765-201ENSMUST00000206927 601 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 Gm45434-201ENSMUST00000210550 293 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC3.27□□□□□ -1.89
Cdx1P18111 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 Gm3338-201ENSMUST00000220982 269 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdx1P18111 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Cdx1P18111 Olfr844-201ENSMUST00000054106 930 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Cdx1P18111 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdx1P18111 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdx1P18111 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
Cdx1P18111 Gm10212-201ENSMUST00000087884 324 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Cdx1P18111 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdx1P18111 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Cdx1P18111 Gm13058-201ENSMUST00000117097 1435 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 Gm44742-201ENSMUST00000207190 1412 ntBASIC3.27□□□□□ -1.89
Cdx1P18111 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
Cdx1P18111 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Cdx1P18111 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx1P18111 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.26□□□□□ -1.89
Cdx1P18111 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Cdx1P18111 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Gm16383-201ENSMUST00000118122 232 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Gm14008-201ENSMUST00000120483 274 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Gm15147-201ENSMUST00000122263 483 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC3.26□□□□□ -1.89
Cdx1P18111 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx1P18111 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx1P18111 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx1P18111 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.26□□□□□ -1.89
Cdx1P18111 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.26□□□□□ -1.89
Cdx1P18111 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx1P18111 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC3.26□□□□□ -1.89
Cdx1P18111 Gm22561-201ENSMUST00000157331 84 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Gm24854-201ENSMUST00000158025 98 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Gm26362-201ENSMUST00000158865 315 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Gm18415-201ENSMUST00000177464 647 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx1P18111 Gm27165-201ENSMUST00000183951 232 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC3.26□□□□□ -1.89
Cdx1P18111 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx1P18111 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC3.26□□□□□ -1.89
Cdx1P18111 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx1P18111 Gm6501-201ENSMUST00000187178 916 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Gm29479-201ENSMUST00000190352 455 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Gm28552-201ENSMUST00000190725 388 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Gm44650-201ENSMUST00000206929 194 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Cdx1P18111 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC3.26□□□□□ -1.89
Cdx1P18111 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.26□□□□□ -1.89
Cdx1P18111 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Gm5176-202ENSMUST00000220267 583 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Cdx1P18111 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.26□□□□□ -1.89
Cdx1P18111 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Cdx1P18111 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Cdx1P18111 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.25□□□□□ -1.89
Cdx1P18111 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cdx1P18111 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cdx1P18111 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Cdx1P18111 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cdx1P18111 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC3.25□□□□□ -1.89
Cdx1P18111 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Cdx1P18111 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Cdx1P18111 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC3.25□□□□□ -1.89
Cdx1P18111 Gm13080-201ENSMUST00000120556 420 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 Gm14908-201ENSMUST00000120930 1286 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 Gm16558-201ENSMUST00000163015 532 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 Adgrg4-206ENSMUST00000168724 531 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 Gm25598-201ENSMUST00000179031 107 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Cdx1P18111 Gm18303-201ENSMUST00000190055 1176 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 Gm8069-201ENSMUST00000197887 154 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 Gm45458-201ENSMUST00000209900 522 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms