Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm26067-201ENSMUST00000103789 110 ntBASIC5.7□□□□□ -1.5
RaraP11416 Mir292-201ENSMUST00000104847 82 ntBASIC5.7□□□□□ -1.5
RaraP11416 Gm14355-201ENSMUST00000117352 264 ntBASIC5.7□□□□□ -1.5
RaraP11416 Gm12806-201ENSMUST00000119384 268 ntBASIC5.7□□□□□ -1.5
RaraP11416 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.7□□□□□ -1.5
RaraP11416 Gm11403-201ENSMUST00000122195 369 ntBASIC5.7□□□□□ -1.5
RaraP11416 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.7□□□□□ -1.5
RaraP11416 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RaraP11416 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.7□□□□□ -1.5
RaraP11416 Gm14333-201ENSMUST00000130484 264 ntBASIC5.7□□□□□ -1.5
RaraP11416 Gm24343-201ENSMUST00000158708 111 ntBASIC5.7□□□□□ -1.5
RaraP11416 Gm22529-201ENSMUST00000158817 123 ntBASIC5.7□□□□□ -1.5
RaraP11416 Gm22911-201ENSMUST00000177920 107 ntBASIC5.7□□□□□ -1.5
RaraP11416 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RaraP11416 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.7□□□□□ -1.5
RaraP11416 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC5.7□□□□□ -1.5
RaraP11416 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RaraP11416 Mir409-201ENSMUST00000198153 79 ntBASIC5.7□□□□□ -1.5
RaraP11416 Gm18482-201ENSMUST00000202405 760 ntBASIC5.7□□□□□ -1.5
RaraP11416 Gm29793-201ENSMUST00000202874 460 ntBASIC5.7□□□□□ -1.5
RaraP11416 Gm44132-201ENSMUST00000205142 151 ntBASIC5.7□□□□□ -1.5
RaraP11416 Gm45614-201ENSMUST00000209994 721 ntBASIC5.7□□□□□ -1.5
RaraP11416 Gm11360-201ENSMUST00000221898 262 ntBASIC5.7□□□□□ -1.5
RaraP11416 AC158142.2-201ENSMUST00000227892 635 ntBASIC5.7□□□□□ -1.5
RaraP11416 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RaraP11416 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RaraP11416 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
RaraP11416 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.7□□□□□ -1.5
RaraP11416 Gm22293-201ENSMUST00000083314 109 ntBASIC5.7□□□□□ -1.5
RaraP11416 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RaraP11416 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RaraP11416 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RaraP11416 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RaraP11416 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RaraP11416 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RaraP11416 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RaraP11416 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.7□□□□□ -1.5
RaraP11416 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RaraP11416 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RaraP11416 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RaraP11416 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RaraP11416 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
RaraP11416 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.7□□□□□ -1.5
RaraP11416 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RaraP11416 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
RaraP11416 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RaraP11416 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RaraP11416 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.69□□□□□ -1.5
RaraP11416 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.69□□□□□ -1.5
RaraP11416 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RaraP11416 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RaraP11416 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RaraP11416 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RaraP11416 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.69□□□□□ -1.5
RaraP11416 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RaraP11416 Gm11221-201ENSMUST00000117230 597 ntBASIC5.69□□□□□ -1.5
RaraP11416 Gm14647-201ENSMUST00000119392 680 ntBASIC5.69□□□□□ -1.5
RaraP11416 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RaraP11416 Gm12231-201ENSMUST00000119447 695 ntBASIC5.69□□□□□ -1.5
RaraP11416 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.69□□□□□ -1.5
RaraP11416 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.69□□□□□ -1.5
RaraP11416 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RaraP11416 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC5.69□□□□□ -1.5
RaraP11416 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC5.69□□□□□ -1.5
RaraP11416 Gm22336-201ENSMUST00000157719 107 ntBASIC5.69□□□□□ -1.5
RaraP11416 Gm24965-201ENSMUST00000157922 106 ntBASIC5.69□□□□□ -1.5
RaraP11416 Gm16557-201ENSMUST00000159182 191 ntBASIC5.69□□□□□ -1.5
RaraP11416 Mir3095-201ENSMUST00000175552 87 ntBASIC5.69□□□□□ -1.5
RaraP11416 Gm26430-201ENSMUST00000178054 107 ntBASIC5.69□□□□□ -1.5
RaraP11416 Gm26180-201ENSMUST00000179942 107 ntBASIC5.69□□□□□ -1.5
RaraP11416 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.69□□□□□ -1.5
RaraP11416 Mir6413-201ENSMUST00000184049 108 ntBASIC5.69□□□□□ -1.5
RaraP11416 Mir7674-201ENSMUST00000184964 63 ntBASIC5.69□□□□□ -1.5
RaraP11416 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RaraP11416 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.69□□□□□ -1.5
RaraP11416 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.69□□□□□ -1.5
RaraP11416 Gm43456-201ENSMUST00000202519 457 ntBASIC5.69□□□□□ -1.5
RaraP11416 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC5.69□□□□□ -1.5
RaraP11416 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.69□□□□□ -1.5
RaraP11416 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.69□□□□□ -1.5
RaraP11416 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RaraP11416 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RaraP11416 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RaraP11416 Gm6043-201ENSMUST00000099961 492 ntBASIC5.69□□□□□ -1.5
RaraP11416 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.69□□□□□ -1.5
RaraP11416 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RaraP11416 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.69□□□□□ -1.5
RaraP11416 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RaraP11416 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RaraP11416 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.69□□□□□ -1.5
RaraP11416 Gm14390-201ENSMUST00000117505 1695 ntBASIC5.69□□□□□ -1.5
RaraP11416 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.69□□□□□ -1.5
RaraP11416 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RaraP11416 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RaraP11416 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RaraP11416 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RaraP11416 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
RaraP11416 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RaraP11416 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RaraP11416 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms