Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm15603-201ENSMUST00000119252 492 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm14294-201ENSMUST00000119749 751 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm12399-201ENSMUST00000121475 446 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm22276-201ENSMUST00000122469 129 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm25321-201ENSMUST00000122558 102 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm23995-201ENSMUST00000158060 129 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm22518-201ENSMUST00000158267 68 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm24359-201ENSMUST00000158418 221 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC4.76□□□□□ -1.65
Hoxd3P09027 Mir6911-201ENSMUST00000184241 69 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm27148-201ENSMUST00000185086 160 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm5372-201ENSMUST00000187540 409 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm7166-201ENSMUST00000199715 303 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm43407-201ENSMUST00000199816 317 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm43282-201ENSMUST00000201848 2157 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm44239-201ENSMUST00000204228 271 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm8523-201ENSMUST00000211386 552 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 AC154527.1-201ENSMUST00000225809 242 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 AC113031.4-201ENSMUST00000228381 514 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm5045-201ENSMUST00000027054 810 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Hoxd3P09027 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 AC125328.1-201ENSMUST00000226812 2265 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Hoxd3P09027 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm37079-201ENSMUST00000194114 2135 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
Hoxd3P09027 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Hoxd3P09027 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
Hoxd3P09027 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Hoxd3P09027 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
Hoxd3P09027 AC159244.3-201ENSMUST00000222887 3153 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Hoxd3P09027 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm1966-201ENSMUST00000184540 7293 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm25538-201ENSMUST00000101943 107 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm25415-201ENSMUST00000104220 132 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm22710-201ENSMUST00000116892 125 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm24482-201ENSMUST00000117005 93 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm14971-201ENSMUST00000117980 663 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm11490-201ENSMUST00000118128 272 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm22345-201ENSMUST00000122644 107 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm13901-201ENSMUST00000137252 468 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm26279-201ENSMUST00000157095 102 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm25150-201ENSMUST00000157121 60 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm26149-201ENSMUST00000157432 108 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm24179-201ENSMUST00000158925 127 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm10319-202ENSMUST00000159439 846 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm17183-201ENSMUST00000171170 493 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm24106-201ENSMUST00000175498 127 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm26501-201ENSMUST00000178307 107 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm37692-201ENSMUST00000192633 232 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm32340-201ENSMUST00000192883 259 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm37416-201ENSMUST00000193596 318 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm43529-201ENSMUST00000199178 412 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm18453-201ENSMUST00000208000 626 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Gm45380-201ENSMUST00000210465 315 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 AC119894.1-201ENSMUST00000220399 350 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 AC241593.1-201ENSMUST00000224768 397 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Hoxd3P09027 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC4.75□□□□□ -1.65
Hoxd3P09027 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
Hoxd3P09027 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Hoxd3P09027 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms