Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC2.8□□□□□ -1.96
Hmgb3O54879 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Hmgb3O54879 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Hmgb3O54879 Mir7676-1-201ENSMUST00000183491 62 ntBASIC2.8□□□□□ -1.96
Hmgb3O54879 Mir7676-2-201ENSMUST00000183523 62 ntBASIC2.8□□□□□ -1.96
Hmgb3O54879 Gm17916-202ENSMUST00000187634 1187 ntBASIC2.8□□□□□ -1.96
Hmgb3O54879 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC2.8□□□□□ -1.96
Hmgb3O54879 Gm18433-202ENSMUST00000195682 196 ntBASIC2.8□□□□□ -1.96
Hmgb3O54879 Gm19080-201ENSMUST00000196082 550 ntBASIC2.8□□□□□ -1.96
Hmgb3O54879 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC2.8□□□□□ -1.96
Hmgb3O54879 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC2.8□□□□□ -1.96
Hmgb3O54879 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.8□□□□□ -1.96
Hmgb3O54879 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Hmgb3O54879 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.8□□□□□ -1.96
Hmgb3O54879 AC122448.1-201ENSMUST00000226317 772 ntBASIC2.8□□□□□ -1.96
Hmgb3O54879 AC154727.1-201ENSMUST00000226537 499 ntBASIC2.8□□□□□ -1.96
Hmgb3O54879 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Hmgb3O54879 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Hmgb3O54879 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC2.8□□□□□ -1.96
Hmgb3O54879 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Hmgb3O54879 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Hmgb3O54879 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Hmgb3O54879 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Hmgb3O54879 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Hmgb3O54879 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Hmgb3O54879 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC2.79□□□□□ -1.96
Hmgb3O54879 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm38286-201ENSMUST00000195128 3105 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Hmgb3O54879 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm13167-201ENSMUST00000118554 578 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm12994-201ENSMUST00000119601 447 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm22531-201ENSMUST00000158819 140 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm25999-201ENSMUST00000175398 133 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Mir6345-201ENSMUST00000184286 128 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm37001-201ENSMUST00000193377 190 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm9379-201ENSMUST00000196790 646 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm19243-201ENSMUST00000198592 269 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm34091-201ENSMUST00000200875 604 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm43198-201ENSMUST00000200927 326 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm5322-201ENSMUST00000206142 699 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm44650-201ENSMUST00000206929 194 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm45689-201ENSMUST00000210522 133 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm6842-201ENSMUST00000211361 390 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC2.79□□□□□ -1.96
Hmgb3O54879 AC125379.1-201ENSMUST00000221928 111 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 AC158955.1-201ENSMUST00000227140 385 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Hmgb3O54879 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Hmgb3O54879 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
Hmgb3O54879 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Hmgb3O54879 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.79□□□□□ -1.96
Hmgb3O54879 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
Hmgb3O54879 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Hmgb3O54879 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Hmgb3O54879 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Mir761-201ENSMUST00000103245 76 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC2.78□□□□□ -1.96
Hmgb3O54879 Mir291a-201ENSMUST00000104815 82 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm12125-201ENSMUST00000117261 736 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm14282-201ENSMUST00000119484 240 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm16005-201ENSMUST00000120515 269 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm13471-201ENSMUST00000122057 433 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm14253-201ENSMUST00000122112 639 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm22107-201ENSMUST00000122548 100 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm25116-201ENSMUST00000157191 122 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm23592-201ENSMUST00000157859 117 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Mir713-201ENSMUST00000178651 108 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm28010-201ENSMUST00000179485 126 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Mir7056-201ENSMUST00000183776 59 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm27315-201ENSMUST00000183977 154 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm6501-201ENSMUST00000187178 916 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC2.78□□□□□ -1.96
Hmgb3O54879 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Hmgb3O54879 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm42832-201ENSMUST00000196361 745 ntBASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC2.78□□□□□ -1.96
Hmgb3O54879 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Hmgb3O54879 Gm44475-201ENSMUST00000204041 424 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms