Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm22456-201ENSMUST00000082578 125 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm25410-201ENSMUST00000083758 137 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm22021-201ENSMUST00000104353 107 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm13321-201ENSMUST00000117101 400 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm26372-201ENSMUST00000157831 236 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm23016-201ENSMUST00000158431 62 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm3470-201ENSMUST00000160819 420 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm22122-201ENSMUST00000175147 200 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm24407-201ENSMUST00000177864 141 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm21978-201ENSMUST00000179696 377 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm27688-201ENSMUST00000183634 91 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm10105-201ENSMUST00000184601 270 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm8241-201ENSMUST00000189286 816 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm43723-201ENSMUST00000196886 189 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm43510-201ENSMUST00000197922 353 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm43501-201ENSMUST00000202513 107 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm44870-201ENSMUST00000207291 357 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm5750-201ENSMUST00000218711 801 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 AC154556.1-201ENSMUST00000224587 885 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm25853-201ENSMUST00000082793 132 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm25141-201ENSMUST00000083177 107 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm22293-201ENSMUST00000083314 109 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Pcdh1F7BJK1 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm22370-201ENSMUST00000102422 83 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm22266-201ENSMUST00000104011 138 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm14359-201ENSMUST00000118883 424 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm16106-201ENSMUST00000119187 294 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm11262-201ENSMUST00000119326 833 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm12691-201ENSMUST00000120186 456 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm14591-201ENSMUST00000120407 518 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm25982-201ENSMUST00000157920 101 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm26866-201ENSMUST00000180414 802 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm27028-201ENSMUST00000182303 399 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm18117-201ENSMUST00000187720 742 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm29229-201ENSMUST00000188874 323 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm7858-201ENSMUST00000190177 622 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm21735-201ENSMUST00000190360 696 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm43825-201ENSMUST00000199650 734 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm29818-201ENSMUST00000218070 165 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 AC132437.1-201ENSMUST00000218308 320 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm18507-201ENSMUST00000218855 525 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm20102-201ENSMUST00000222445 220 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms