Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm21539-201ENSMUST00000177925 498 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col6a4A2AX52 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm17522-201ENSMUST00000178144 498 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm21599-201ENSMUST00000178249 498 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm21914-201ENSMUST00000178452 498 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm21723-201ENSMUST00000178692 498 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm21916-201ENSMUST00000178771 498 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm21801-201ENSMUST00000178865 498 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm21633-201ENSMUST00000178941 498 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm17412-201ENSMUST00000179261 468 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm21821-201ENSMUST00000179646 498 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm21588-201ENSMUST00000180074 498 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm21780-201ENSMUST00000180128 498 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm21572-201ENSMUST00000180134 498 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm21529-201ENSMUST00000180175 498 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Mir6413-201ENSMUST00000184049 108 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm29370-202ENSMUST00000187476 499 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC2.75□□□□□ -1.97
Col6a4A2AX52 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm45006-201ENSMUST00000206078 690 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Gm20946-201ENSMUST00000212367 461 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Col6a4A2AX52 CT010444.1-201ENSMUST00000219963 3845 ntBASIC2.75□□□□□ -1.97
Col6a4A2AX52 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC2.74□□□□□ -1.97
Col6a4A2AX52 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC2.74□□□□□ -1.97
Col6a4A2AX52 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Gm18604-201ENSMUST00000172535 558 ntBASIC2.74□□□□□ -1.97
Col6a4A2AX52 Gm19726-201ENSMUST00000205008 240 ntBASIC2.74□□□□□ -1.97
Col6a4A2AX52 Gm45513-201ENSMUST00000210228 376 ntBASIC2.74□□□□□ -1.97
Col6a4A2AX52 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col6a4A2AX52 AC124346.2-201ENSMUST00000217986 5083 ntBASIC2.74□□□□□ -1.97
Col6a4A2AX52 Gm37211-201ENSMUST00000193392 3433 ntBASIC2.74□□□□□ -1.97
Col6a4A2AX52 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Gm37703-201ENSMUST00000192292 1784 ntBASIC2.74□□□□□ -1.97
Col6a4A2AX52 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Gm22849-201ENSMUST00000157713 307 ntBASIC2.74□□□□□ -1.97
Col6a4A2AX52 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Gm28785-201ENSMUST00000187478 379 ntBASIC2.74□□□□□ -1.97
Col6a4A2AX52 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.74□□□□□ -1.97
Col6a4A2AX52 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.74□□□□□ -1.97
Col6a4A2AX52 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC2.74□□□□□ -1.97
Col6a4A2AX52 AC117797.2-201ENSMUST00000224419 531 ntBASIC2.74□□□□□ -1.97
Col6a4A2AX52 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col6a4A2AX52 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col6a4A2AX52 Gm22939-201ENSMUST00000103958 131 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC2.73□□□□□ -1.97
Col6a4A2AX52 Gm14649-201ENSMUST00000121814 324 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 Gm23591-201ENSMUST00000157663 286 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 Gm27505-201ENSMUST00000185071 110 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 Gm8242-202ENSMUST00000193056 475 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 Gm19620-201ENSMUST00000195972 434 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 Gm19232-201ENSMUST00000211621 652 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.73□□□□□ -1.97
Col6a4A2AX52 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 Gm23615-201ENSMUST00000082602 65 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col6a4A2AX52 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col6a4A2AX52 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Col6a4A2AX52 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col6a4A2AX52 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col6a4A2AX52 Gm43319-201ENSMUST00000198036 2270 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col6a4A2AX52 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col6a4A2AX52 Gm12261-201ENSMUST00000117499 645 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 Gm11830-201ENSMUST00000120175 561 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 Mir8090-201ENSMUST00000185078 136 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 Gm18692-201ENSMUST00000193047 511 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 AC166323.1-201ENSMUST00000217756 367 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 AC153544.1-201ENSMUST00000217988 400 ntBASIC2.73□□□□□ -1.97
Col6a4A2AX52 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Col6a4A2AX52 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC2.73□□□□□ -1.97
Col6a4A2AX52 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col6a4A2AX52 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Col6a4A2AX52 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC2.72□□□□□ -1.97
Col6a4A2AX52 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Col6a4A2AX52 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Col6a4A2AX52 Gm12586-201ENSMUST00000117328 1316 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col6a4A2AX52 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms