Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC2.53□□□□□ -2
Smco4Q9JIS3 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC2.53□□□□□ -2
Smco4Q9JIS3 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC2.53□□□□□ -2
Smco4Q9JIS3 Gm16250-201ENSMUST00000148974 256 ntBASIC2.53□□□□□ -2
Smco4Q9JIS3 Gm22034-201ENSMUST00000157283 134 ntBASIC2.53□□□□□ -2
Smco4Q9JIS3 Gm27903-201ENSMUST00000175482 126 ntBASIC2.53□□□□□ -2
Smco4Q9JIS3 Gm19791-201ENSMUST00000180398 859 ntBASIC2.53□□□□□ -2
Smco4Q9JIS3 Gm29658-201ENSMUST00000185404 230 ntBASIC2.53□□□□□ -2
Smco4Q9JIS3 Gm29479-201ENSMUST00000190352 455 ntBASIC2.53□□□□□ -2
Smco4Q9JIS3 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC2.53□□□□□ -2
Smco4Q9JIS3 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Smco4Q9JIS3 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
Smco4Q9JIS3 Gm43954-201ENSMUST00000204634 544 ntBASIC2.53□□□□□ -2
Smco4Q9JIS3 Gm45228-201ENSMUST00000206585 352 ntBASIC2.53□□□□□ -2
Smco4Q9JIS3 AC135019.1-201ENSMUST00000219949 307 ntBASIC2.53□□□□□ -2
Smco4Q9JIS3 AC140930.4-201ENSMUST00000220750 150 ntBASIC2.53□□□□□ -2
Smco4Q9JIS3 Gm17872-201ENSMUST00000222550 532 ntBASIC2.53□□□□□ -2
Smco4Q9JIS3 AC154241.1-201ENSMUST00000223952 356 ntBASIC2.53□□□□□ -2
Smco4Q9JIS3 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.53□□□□□ -2
Smco4Q9JIS3 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.53□□□□□ -2
Smco4Q9JIS3 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC2.53□□□□□ -2
Smco4Q9JIS3 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Smco4Q9JIS3 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC2.53□□□□□ -2
Smco4Q9JIS3 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Smco4Q9JIS3 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Smco4Q9JIS3 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm7646-201ENSMUST00000198590 1346 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm16005-201ENSMUST00000120515 269 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm23213-201ENSMUST00000122715 313 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm25965-201ENSMUST00000157170 93 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm24736-201ENSMUST00000158862 130 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm23775-201ENSMUST00000158991 249 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm16490-201ENSMUST00000165299 351 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Mir3090-201ENSMUST00000175597 87 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm27976-201ENSMUST00000183635 162 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm27308-201ENSMUST00000184807 233 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Mir7674-201ENSMUST00000184964 63 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm37343-201ENSMUST00000192542 111 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm8790-201ENSMUST00000194108 322 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 AC124581.4-201ENSMUST00000225874 463 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm9818-201ENSMUST00000050900 255 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Gm5155-201ENSMUST00000072381 2841 ntBASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Smco4Q9JIS3 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm37802-201ENSMUST00000194998 2643 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm7853-201ENSMUST00000100708 478 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Mir680-1-201ENSMUST00000102257 109 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Lipe-203ENSMUST00000105177 1251 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm12492-201ENSMUST00000117665 564 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm12287-201ENSMUST00000119770 707 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm13574-201ENSMUST00000120482 394 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm11882-201ENSMUST00000121463 506 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm15885-201ENSMUST00000122114 388 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm23554-201ENSMUST00000157818 110 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm25713-201ENSMUST00000158625 109 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm16589-201ENSMUST00000159522 918 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Mir8096-201ENSMUST00000184526 127 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm28628-201ENSMUST00000187006 264 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm28629-201ENSMUST00000187309 263 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm37701-201ENSMUST00000192947 1100 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm43724-201ENSMUST00000197516 226 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm5551-201ENSMUST00000199720 690 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm7407-201ENSMUST00000208301 568 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 AC154626.1-201ENSMUST00000226070 311 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 AC154727.1-201ENSMUST00000226537 499 ntBASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms