Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Mir342-201ENSMUST00000083502 99 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Trim39Q9ESN2 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Trim39Q9ESN2 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Trim39Q9ESN2 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Trim39Q9ESN2 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Trim39Q9ESN2 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Trim39Q9ESN2 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.34□□□□□ -1.56
Trim39Q9ESN2 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm22831-201ENSMUST00000102473 109 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm15215-201ENSMUST00000117773 489 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm14566-201ENSMUST00000118915 321 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm14570-201ENSMUST00000119444 391 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm13578-201ENSMUST00000120849 590 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm13531-201ENSMUST00000121893 543 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 n-R5s87-201ENSMUST00000122752 116 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm25666-201ENSMUST00000157702 107 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm16164-201ENSMUST00000160078 468 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm17366-201ENSMUST00000167629 187 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm24300-201ENSMUST00000177809 109 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm4761-201ENSMUST00000178086 582 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm24017-201ENSMUST00000178726 109 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm23952-201ENSMUST00000179380 109 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm24464-201ENSMUST00000179697 107 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm29512-201ENSMUST00000185544 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28110-201ENSMUST00000185782 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28838-201ENSMUST00000186338 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm29057-201ENSMUST00000186468 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm29661-201ENSMUST00000186781 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28737-201ENSMUST00000186808 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm29118-201ENSMUST00000186908 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28433-201ENSMUST00000187085 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm29635-201ENSMUST00000187221 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28759-201ENSMUST00000187621 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28831-201ENSMUST00000187739 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28200-201ENSMUST00000187778 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm29026-201ENSMUST00000187787 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28752-201ENSMUST00000188340 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28797-201ENSMUST00000188543 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28855-201ENSMUST00000188680 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm29378-201ENSMUST00000188723 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28569-201ENSMUST00000188748 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28120-201ENSMUST00000188812 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28369-201ENSMUST00000188993 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm29037-201ENSMUST00000189092 313 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28909-201ENSMUST00000189406 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28705-201ENSMUST00000189548 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28861-201ENSMUST00000189681 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm29180-201ENSMUST00000190003 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28939-201ENSMUST00000190351 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm28223-201ENSMUST00000190469 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm29575-201ENSMUST00000190597 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm29092-201ENSMUST00000190768 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm29469-201ENSMUST00000191448 315 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm20770-201ENSMUST00000193474 694 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm44316-201ENSMUST00000199274 97 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 AL450317.1-201ENSMUST00000213941 291 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm4012-201ENSMUST00000221504 581 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 AV026068-237ENSMUST00000226075 572 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Gm8412-201ENSMUST00000077493 440 ntBASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim39Q9ESN2 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim39Q9ESN2 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.32□□□□□ -1.56
Trim39Q9ESN2 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim39Q9ESN2 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Trim39Q9ESN2 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms