Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm2092-201ENSMUST00000178887 639 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm22259-201ENSMUST00000178926 107 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm2759-201ENSMUST00000179938 639 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm36382-201ENSMUST00000198892 541 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Trav15n-3-201ENSMUST00000200498 168 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm43919-201ENSMUST00000204303 364 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm45209-201ENSMUST00000207122 353 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm44820-201ENSMUST00000207420 396 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm17989-201ENSMUST00000211543 412 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 AC155237.2-201ENSMUST00000228487 478 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm23459-201ENSMUST00000083259 131 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm6361-201ENSMUST00000091031 435 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm15981-201ENSMUST00000119196 457 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm12369-201ENSMUST00000121343 942 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm12087-201ENSMUST00000121878 258 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm25826-201ENSMUST00000157090 137 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm26102-201ENSMUST00000157251 284 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm24289-201ENSMUST00000157629 135 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm23277-201ENSMUST00000157914 136 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm28283-201ENSMUST00000185509 178 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm8600-201ENSMUST00000186320 905 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm8419-201ENSMUST00000189886 412 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm3010-201ENSMUST00000198805 448 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm42886-201ENSMUST00000199214 466 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm44307-201ENSMUST00000204466 764 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm44074-201ENSMUST00000204562 337 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm44765-201ENSMUST00000206927 601 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm7034-201ENSMUST00000218638 645 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm7540-201ENSMUST00000219764 926 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm25134-201ENSMUST00000082646 160 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm25699-201ENSMUST00000082896 167 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm23412-201ENSMUST00000083017 107 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm25937-201ENSMUST00000083912 107 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.57□□□□□ -1.52
Trim42Q9D2H5 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim42Q9D2H5 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim42Q9D2H5 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim42Q9D2H5 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Trim42Q9D2H5 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.56□□□□□ -1.52
Trim42Q9D2H5 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim42Q9D2H5 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim42Q9D2H5 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim42Q9D2H5 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Trim42Q9D2H5 Gm25595-201ENSMUST00000102273 97 ntBASIC5.56□□□□□ -1.52
Trim42Q9D2H5 Mir208b-201ENSMUST00000104735 77 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms