Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 AC151831.1-201ENSMUST00000227609 4033 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm14607-201ENSMUST00000119119 491 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm5942-201ENSMUST00000120046 439 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm11410-201ENSMUST00000120053 1143 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm16250-201ENSMUST00000148974 256 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm26347-201ENSMUST00000157526 131 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm23501-201ENSMUST00000157744 256 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm23269-201ENSMUST00000178701 107 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm16378-201ENSMUST00000179168 342 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm27428-201ENSMUST00000184289 110 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm3145-201ENSMUST00000188584 220 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm43142-201ENSMUST00000198670 361 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm43825-201ENSMUST00000199650 734 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 CR974485.1-201ENSMUST00000222408 402 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Snora52-201ENSMUST00000082732 137 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm25699-201ENSMUST00000082896 167 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm23677-201ENSMUST00000083156 104 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm43665-201ENSMUST00000198672 1659 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.2□□□□□ -1.58
Ushbp1Q8R370 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ushbp1Q8R370 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm44708-201ENSMUST00000205580 2237 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm15752-201ENSMUST00000117427 394 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm12186-201ENSMUST00000119050 945 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm11876-201ENSMUST00000120002 269 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm13220-201ENSMUST00000121535 508 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm12358-201ENSMUST00000121842 520 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm14775-201ENSMUST00000122089 310 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm28594-201ENSMUST00000187022 661 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm44990-201ENSMUST00000203922 217 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm17811-201ENSMUST00000206193 387 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm45226-201ENSMUST00000206602 288 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 AC134860.6-201ENSMUST00000226038 285 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 AC115735.3-201ENSMUST00000227757 513 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 AC144628.1-201ENSMUST00000227943 466 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 AC074315.1-201ENSMUST00000228801 214 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm44527-202ENSMUST00000204519 1314 ntBASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms