Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm23025-201ENSMUST00000158769 111 ntBASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Gm6075-201ENSMUST00000186816 486 ntBASIC5.15□□□□□ -1.59
Vps53Q8CCB4 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Gm17953-201ENSMUST00000192061 667 ntBASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Gm43096-201ENSMUST00000196173 421 ntBASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 AC124433.2-201ENSMUST00000223867 291 ntBASIC5.15□□□□□ -1.59
Vps53Q8CCB4 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Synpr-207ENSMUST00000223583 3362 ntBASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.15□□□□□ -1.59
Vps53Q8CCB4 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.15□□□□□ -1.59
Vps53Q8CCB4 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Zfp640-202ENSMUST00000224116 1562 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Mir466n-201ENSMUST00000104798 94 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm24590-201ENSMUST00000116699 119 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm14656-201ENSMUST00000120342 502 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm12706-201ENSMUST00000121588 698 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm25106-201ENSMUST00000122672 134 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm23885-201ENSMUST00000122682 294 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm26194-201ENSMUST00000175036 71 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm26652-202ENSMUST00000181672 475 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm27883-201ENSMUST00000183941 102 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm29479-201ENSMUST00000190352 455 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm19237-201ENSMUST00000205036 1132 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm46234-201ENSMUST00000218702 259 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 AC168062.2-201ENSMUST00000228907 422 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm38235-201ENSMUST00000194600 4952 ntBASIC5.14□□□□□ -1.59
Vps53Q8CCB4 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm43498-201ENSMUST00000202002 1486 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm14163-201ENSMUST00000117342 217 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm11359-201ENSMUST00000120039 567 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm14500-201ENSMUST00000121647 113 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm24498-201ENSMUST00000158445 102 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm26914-201ENSMUST00000182262 223 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm27165-201ENSMUST00000183951 232 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm27236-201ENSMUST00000184147 442 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm8676-201ENSMUST00000184206 637 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Mir7j-201ENSMUST00000184427 122 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm27457-201ENSMUST00000184771 156 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm3454-201ENSMUST00000185571 412 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm17956-201ENSMUST00000199931 838 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm43925-201ENSMUST00000203498 206 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm19032-201ENSMUST00000208584 592 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm45434-201ENSMUST00000210550 293 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Gm17779-201ENSMUST00000213395 394 ntBASIC5.13□□□□□ -1.59
Vps53Q8CCB4 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms