Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm18594-201ENSMUST00000175733 1403 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm45540-201ENSMUST00000209271 3606 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm24318-201ENSMUST00000104490 131 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm6797-201ENSMUST00000119440 512 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm11718-201ENSMUST00000119942 537 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm13511-201ENSMUST00000121167 363 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm25965-201ENSMUST00000157170 93 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm22637-201ENSMUST00000158144 283 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm23023-201ENSMUST00000158767 109 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm24875-201ENSMUST00000158888 104 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm22111-201ENSMUST00000178010 79 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm23687-201ENSMUST00000178664 79 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm24566-201ENSMUST00000179286 79 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm23305-201ENSMUST00000179342 79 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm26389-201ENSMUST00000179819 79 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm22130-201ENSMUST00000179979 79 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm22393-201ENSMUST00000180153 79 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm25085-201ENSMUST00000180298 79 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm37501-201ENSMUST00000192830 691 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm18039-201ENSMUST00000217816 728 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm16419-201ENSMUST00000221057 625 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 CT009733.1-201ENSMUST00000225322 425 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc40Q8BI79 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gm24273-201ENSMUST00000102332 164 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gm22778-201ENSMUST00000104090 128 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gm22657-201ENSMUST00000104197 132 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gm5943-201ENSMUST00000119458 459 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gm14119-201ENSMUST00000119511 235 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gm15488-201ENSMUST00000121682 670 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gm38088-201ENSMUST00000195829 241 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gm3189-201ENSMUST00000205595 832 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gm46998-201ENSMUST00000221444 330 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 AC192088.2-201ENSMUST00000227590 411 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc40Q8BI79 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Gm13155-201ENSMUST00000119277 646 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Gm12994-201ENSMUST00000119601 447 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Gm6079-201ENSMUST00000121356 404 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Gm8178-201ENSMUST00000121570 646 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Gm12885-201ENSMUST00000122246 328 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Gm22764-201ENSMUST00000158370 92 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms