Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm25982-201ENSMUST00000157920 101 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Gm25655-201ENSMUST00000158465 290 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Gm3851-201ENSMUST00000168653 318 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Gm24713-201ENSMUST00000178850 107 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Gm25448-201ENSMUST00000180065 107 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Mir6899-201ENSMUST00000184798 64 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Gm5372-201ENSMUST00000187540 409 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Gm28066-201ENSMUST00000188657 472 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Gm44609-201ENSMUST00000207157 460 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 AC113031.5-201ENSMUST00000227116 606 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 AC112935.1-201ENSMUST00000227603 250 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Gm25792-201ENSMUST00000083289 100 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.81□□□□□ -1.48
Prpf38bQ80SY5 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm43834-201ENSMUST00000197097 4830 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 CT009510.2-203ENSMUST00000226704 2136 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm15840-201ENSMUST00000122099 943 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm24689-201ENSMUST00000157760 104 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm24240-201ENSMUST00000157785 135 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Mir3104-201ENSMUST00000174911 63 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm24100-201ENSMUST00000178592 79 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm24137-201ENSMUST00000180055 79 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm22391-201ENSMUST00000180356 79 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm38076-201ENSMUST00000193889 450 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm43723-201ENSMUST00000196886 189 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Mir6375-201ENSMUST00000197176 95 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm29736-201ENSMUST00000198189 385 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm19147-201ENSMUST00000199622 652 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm44060-201ENSMUST00000204440 410 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm34224-201ENSMUST00000204606 364 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm44870-201ENSMUST00000207291 357 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Supt4b-201ENSMUST00000214434 351 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 AC118639.1-201ENSMUST00000227204 338 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 AC157772.2-201ENSMUST00000228202 259 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm22740-201ENSMUST00000083439 109 ntBASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Prpf38bQ80SY5 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf38bQ80SY5 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf38bQ80SY5 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf38bQ80SY5 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Prpf38bQ80SY5 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.79□□□□□ -1.48
Prpf38bQ80SY5 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Prpf38bQ80SY5 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Prpf38bQ80SY5 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Prpf38bQ80SY5 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Prpf38bQ80SY5 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Prpf38bQ80SY5 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.79□□□□□ -1.48
Prpf38bQ80SY5 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf38bQ80SY5 Gm11221-201ENSMUST00000117230 597 ntBASIC5.79□□□□□ -1.48
Prpf38bQ80SY5 Gm11813-201ENSMUST00000118586 291 ntBASIC5.79□□□□□ -1.48
Prpf38bQ80SY5 Gm15988-201ENSMUST00000118677 367 ntBASIC5.79□□□□□ -1.48
Prpf38bQ80SY5 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms