Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Topbp1Q6ZQF0 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Topbp1Q6ZQF0 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.68□□□□□ -1.66
Topbp1Q6ZQF0 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Topbp1Q6ZQF0 Gm38081-201ENSMUST00000192680 1645 ntBASIC4.68□□□□□ -1.66
Topbp1Q6ZQF0 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.68□□□□□ -1.66
Topbp1Q6ZQF0 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.68□□□□□ -1.66
Topbp1Q6ZQF0 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm13064-201ENSMUST00000119125 557 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm14586-201ENSMUST00000119571 408 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm24190-201ENSMUST00000157976 216 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm26041-201ENSMUST00000158148 108 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Mir3092-201ENSMUST00000174954 96 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm21960-201ENSMUST00000181924 452 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm44526-201ENSMUST00000204664 121 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm7754-201ENSMUST00000223075 2064 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 n-R5s32-201ENSMUST00000122495 103 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm21827-201ENSMUST00000178247 423 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Mir6715-201ENSMUST00000184990 57 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm29218-205ENSMUST00000190846 615 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Gm45031-201ENSMUST00000206800 288 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Topbp1Q6ZQF0 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Gm13155-201ENSMUST00000119277 646 ntBASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Gm13170-201ENSMUST00000119716 643 ntBASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Gm8178-201ENSMUST00000121570 646 ntBASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Gm25373-201ENSMUST00000158156 115 ntBASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Gm9379-201ENSMUST00000196790 646 ntBASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Gm44223-201ENSMUST00000204854 114 ntBASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Gm35405-201ENSMUST00000218754 400 ntBASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Gm19181-201ENSMUST00000218891 940 ntBASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Gm22249-201ENSMUST00000082485 136 ntBASIC4.66□□□□□ -1.66
Topbp1Q6ZQF0 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Topbp1Q6ZQF0 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
Topbp1Q6ZQF0 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
Topbp1Q6ZQF0 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Topbp1Q6ZQF0 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Topbp1Q6ZQF0 Gm13865-201ENSMUST00000120957 865 ntBASIC4.65□□□□□ -1.67
Topbp1Q6ZQF0 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.65□□□□□ -1.67
Topbp1Q6ZQF0 Gm22852-201ENSMUST00000177899 101 ntBASIC4.65□□□□□ -1.67
Topbp1Q6ZQF0 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.65□□□□□ -1.67
Topbp1Q6ZQF0 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Topbp1Q6ZQF0 Mir504-201ENSMUST00000093602 79 ntBASIC4.65□□□□□ -1.67
Topbp1Q6ZQF0 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Topbp1Q6ZQF0 AC132336.1-201ENSMUST00000222844 1740 ntBASIC4.65□□□□□ -1.67
Topbp1Q6ZQF0 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Gm15493-201ENSMUST00000119461 528 ntBASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Gm44370-201ENSMUST00000175436 112 ntBASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Mir6905-201ENSMUST00000184228 70 ntBASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Gm27308-201ENSMUST00000184807 233 ntBASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Gm18433-202ENSMUST00000195682 196 ntBASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Amd-ps5-201ENSMUST00000198406 989 ntBASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Gm9023-201ENSMUST00000198408 1038 ntBASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Gm19039-201ENSMUST00000204363 575 ntBASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Gm19126-201ENSMUST00000207896 509 ntBASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Gm45269-201ENSMUST00000210359 282 ntBASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.64□□□□□ -1.67
Topbp1Q6ZQF0 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.63□□□□□ -1.67
Topbp1Q6ZQF0 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Topbp1Q6ZQF0 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.63□□□□□ -1.67
Topbp1Q6ZQF0 Gm26423-201ENSMUST00000104277 128 ntBASIC4.63□□□□□ -1.67
Topbp1Q6ZQF0 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC4.63□□□□□ -1.67
Topbp1Q6ZQF0 Gm24675-201ENSMUST00000158757 259 ntBASIC4.63□□□□□ -1.67
Topbp1Q6ZQF0 Gm18604-201ENSMUST00000172535 558 ntBASIC4.63□□□□□ -1.67
Topbp1Q6ZQF0 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Topbp1Q6ZQF0 Gm20162-201ENSMUST00000193629 871 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms