Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
Trim28Q62318 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim28Q62318 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim28Q62318 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim28Q62318 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim28Q62318 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim28Q62318 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim28Q62318 Gm43870-201ENSMUST00000205102 4369 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm25647-201ENSMUST00000101832 78 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm25823-201ENSMUST00000101995 78 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm15010-201ENSMUST00000117153 407 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm11322-201ENSMUST00000118095 435 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim28Q62318 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm11575-201ENSMUST00000122243 228 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm22390-201ENSMUST00000157588 325 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm17194-201ENSMUST00000164610 348 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim28Q62318 Gm24220-201ENSMUST00000177753 79 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm25988-201ENSMUST00000177759 79 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm23471-201ENSMUST00000177886 79 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm24417-201ENSMUST00000178123 79 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm26488-201ENSMUST00000178225 79 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm24653-201ENSMUST00000178541 79 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm25934-201ENSMUST00000178642 79 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm23449-201ENSMUST00000179208 79 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm21816-201ENSMUST00000179255 360 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm25221-201ENSMUST00000180051 79 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim28Q62318 Gm29484-201ENSMUST00000186067 324 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm43979-201ENSMUST00000203179 475 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm18855-201ENSMUST00000206689 570 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Gm4921-201ENSMUST00000219804 992 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 AC139750.2-201ENSMUST00000224424 386 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Trim28Q62318 Gm10794-201ENSMUST00000099624 207 ntBASIC5.54□□□□□ -1.52
Trim28Q62318 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim28Q62318 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
Trim28Q62318 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim28Q62318 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim28Q62318 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim28Q62318 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim28Q62318 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim28Q62318 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim28Q62318 Gm11488-201ENSMUST00000117277 863 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Gm12760-201ENSMUST00000117861 482 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Gm13508-201ENSMUST00000121639 775 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim28Q62318 Gm25999-201ENSMUST00000175398 133 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim28Q62318 Mir6996-201ENSMUST00000183922 61 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC5.53□□□□□ -1.52
Trim28Q62318 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim28Q62318 Gm28700-201ENSMUST00000187614 579 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Gm28779-201ENSMUST00000189678 323 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Gm37946-201ENSMUST00000192064 347 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Gm19694-201ENSMUST00000192364 505 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Gm37869-201ENSMUST00000193385 595 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Gm43586-201ENSMUST00000195948 310 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Gm9375-201ENSMUST00000208899 903 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC5.53□□□□□ -1.52
Trim28Q62318 AC154390.1-201ENSMUST00000225629 277 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 AC168059.1-201ENSMUST00000225846 841 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim28Q62318 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim28Q62318 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim28Q62318 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim28Q62318 Gm10916-201ENSMUST00000080330 483 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim28Q62318 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim28Q62318 Gm3089-201ENSMUST00000200804 1395 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Gm3302-201ENSMUST00000201462 1395 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Gm45131-201ENSMUST00000208051 2582 ntBASIC5.53□□□□□ -1.52
Trim28Q62318 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim28Q62318 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim28Q62318 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim28Q62318 Gm42841-201ENSMUST00000199806 1932 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim28Q62318 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim28Q62318 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim28Q62318 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim28Q62318 Gm15001-201ENSMUST00000117657 795 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 Gm12087-201ENSMUST00000121878 258 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 Gm24592-201ENSMUST00000122505 106 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 Gm24635-201ENSMUST00000122712 128 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 Gm16134-201ENSMUST00000161714 336 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 Igkv17-134-201ENSMUST00000168310 348 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim28Q62318 Gm23816-201ENSMUST00000179617 132 ntBASIC5.52□□□□□ -1.53
Trim28Q62318 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim28Q62318 Gm27539-201ENSMUST00000184971 224 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms