Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Mir6994-201ENSMUST00000198985 73 ntBASIC7.28□□□□□ -1.24
Scaf1Q5U4C3 Gm44330-201ENSMUST00000200106 143 ntBASIC7.28□□□□□ -1.24
Scaf1Q5U4C3 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Scaf1Q5U4C3 AC158633.1-201ENSMUST00000219892 649 ntBASIC7.28□□□□□ -1.24
Scaf1Q5U4C3 Gm22740-201ENSMUST00000083439 109 ntBASIC7.28□□□□□ -1.24
Scaf1Q5U4C3 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Scaf1Q5U4C3 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Scaf1Q5U4C3 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Scaf1Q5U4C3 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Scaf1Q5U4C3 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Scaf1Q5U4C3 Gm37814-201ENSMUST00000195820 3644 ntBASIC7.28□□□□□ -1.24
Scaf1Q5U4C3 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
Scaf1Q5U4C3 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
Scaf1Q5U4C3 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Mir667-201ENSMUST00000102441 92 ntBASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Gm12852-201ENSMUST00000119478 719 ntBASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Gm6062-201ENSMUST00000120462 631 ntBASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Gm26993-201ENSMUST00000182766 789 ntBASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Gm43444-201ENSMUST00000198123 291 ntBASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Gm44468-201ENSMUST00000199516 105 ntBASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Gm44776-201ENSMUST00000207212 381 ntBASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Gm20102-201ENSMUST00000222445 220 ntBASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 AC154548.1-201ENSMUST00000225844 3838 ntBASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 AC118639.1-201ENSMUST00000227204 338 ntBASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 AC153532.3-201ENSMUST00000218660 3848 ntBASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Scaf1Q5U4C3 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm37588-201ENSMUST00000195024 2496 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm7529-201ENSMUST00000213753 1897 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm22266-201ENSMUST00000104011 138 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm11813-201ENSMUST00000118586 291 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm12806-201ENSMUST00000119384 268 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm13007-201ENSMUST00000121866 365 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm24784-201ENSMUST00000157640 62 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm24713-201ENSMUST00000178850 107 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm25448-201ENSMUST00000180065 107 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm29228-201ENSMUST00000185489 418 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm37421-201ENSMUST00000193088 132 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm32447-201ENSMUST00000194265 697 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 AC183268.2-201ENSMUST00000214513 446 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 AC126554.1-201ENSMUST00000222161 271 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 CT030182.2-201ENSMUST00000223569 620 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 CT030195.1-201ENSMUST00000223887 378 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm24706-201ENSMUST00000082806 137 ntBASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf1Q5U4C3 Gm42686-201ENSMUST00000199172 4108 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm43260-201ENSMUST00000197378 2430 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm24429-201ENSMUST00000104076 132 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm26156-201ENSMUST00000116999 123 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm14647-201ENSMUST00000119392 680 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm11625-201ENSMUST00000119535 296 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm11369-201ENSMUST00000120812 318 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm23837-201ENSMUST00000122656 286 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Gm16345-201ENSMUST00000146065 158 ntBASIC7.25□□□□□ -1.25
Scaf1Q5U4C3 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms