Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm14389-201ENSMUST00000140453 241 ntBASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm26215-201ENSMUST00000158584 139 ntBASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm18698-201ENSMUST00000192327 668 ntBASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm19104-201ENSMUST00000198392 679 ntBASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm43930-201ENSMUST00000203868 845 ntBASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm45735-201ENSMUST00000212779 319 ntBASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm37677-201ENSMUST00000194520 7634 ntBASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm42455-201ENSMUST00000199761 2736 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm11877-201ENSMUST00000118921 852 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm8840-201ENSMUST00000122454 386 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm25553-201ENSMUST00000158076 79 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Mir3092-201ENSMUST00000174954 96 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Snord92-201ENSMUST00000175548 85 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm24950-201ENSMUST00000082768 191 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm23971-201ENSMUST00000083317 191 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm23849-201ENSMUST00000083833 191 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm26316-201ENSMUST00000083886 191 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm14912-201ENSMUST00000120166 1773 ntBASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc88aQ5SNZ0 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm9432-201ENSMUST00000117810 759 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm13155-201ENSMUST00000119277 646 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm15267-201ENSMUST00000120888 464 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm8178-201ENSMUST00000121570 646 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm13502-201ENSMUST00000121574 684 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm14581-201ENSMUST00000121726 198 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm23592-201ENSMUST00000157859 117 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm18953-201ENSMUST00000175694 300 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm13761-201ENSMUST00000117238 807 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm44223-201ENSMUST00000204854 114 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm19987-201ENSMUST00000216339 499 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc88aQ5SNZ0 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ccdc88aQ5SNZ0 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm14622-201ENSMUST00000117117 468 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms