Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm25535-201ENSMUST00000175364 125 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm24365-201ENSMUST00000175384 125 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm44310-201ENSMUST00000175424 126 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm22639-201ENSMUST00000175591 125 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm24979-201ENSMUST00000178626 126 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm27155-201ENSMUST00000183716 898 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Mir6238-201ENSMUST00000184140 129 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm27743-201ENSMUST00000185136 126 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm9775-201ENSMUST00000189402 331 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm36964-201ENSMUST00000191876 198 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm6680-201ENSMUST00000192789 950 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm44376-201ENSMUST00000197570 128 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm42593-201ENSMUST00000198469 377 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm43925-201ENSMUST00000203498 206 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm44824-201ENSMUST00000207021 229 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm45327-201ENSMUST00000211612 565 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm36247-201ENSMUST00000211834 285 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm18645-202ENSMUST00000212222 760 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm7530-201ENSMUST00000218466 605 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm25800-201ENSMUST00000082636 134 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm22739-201ENSMUST00000083437 160 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm6361-201ENSMUST00000091031 435 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm10161-201ENSMUST00000091506 204 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Trav6-2Q5R1I4 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.21□□□□□ -1.89
Trav6-2Q5R1I4 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm23609-201ENSMUST00000104542 127 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm14586-201ENSMUST00000119571 408 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm7846-201ENSMUST00000145844 274 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm23753-201ENSMUST00000157575 149 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm22890-201ENSMUST00000158642 144 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm15946-201ENSMUST00000160654 423 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Trbv10-201ENSMUST00000168322 289 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm28591-201ENSMUST00000185259 183 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm8679-201ENSMUST00000210651 1036 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 AC167202.1-201ENSMUST00000219027 331 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 AC154692.1-201ENSMUST00000228314 544 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm2710-201ENSMUST00000073196 603 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Gm25799-201ENSMUST00000082643 107 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 AC152981.1-201ENSMUST00000218320 2480 ntBASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Trav6-2Q5R1I4 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm44860-201ENSMUST00000208473 2346 ntBASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm7754-201ENSMUST00000223075 2064 ntBASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm24608-201ENSMUST00000104381 136 ntBASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm22497-201ENSMUST00000104499 131 ntBASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm23530-201ENSMUST00000104564 137 ntBASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm14771-201ENSMUST00000118249 203 ntBASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm13359-201ENSMUST00000119000 695 ntBASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm24730-201ENSMUST00000158228 117 ntBASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm25860-201ENSMUST00000158252 126 ntBASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm25519-201ENSMUST00000158392 127 ntBASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm24976-201ENSMUST00000158972 135 ntBASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trav6-2Q5R1I4 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms