Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Gm38198-201ENSMUST00000191772 3581 ntBASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Gm15670-201ENSMUST00000117740 447 ntBASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Defa-ps11-201ENSMUST00000119719 299 ntBASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Gm11825-201ENSMUST00000120710 736 ntBASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Gm23211-201ENSMUST00000122717 308 ntBASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Gm25389-201ENSMUST00000157340 286 ntBASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Gm25412-201ENSMUST00000180258 107 ntBASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Gm27028-201ENSMUST00000182303 399 ntBASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Gm28094-201ENSMUST00000185262 390 ntBASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Gm45005-201ENSMUST00000206640 157 ntBASIC9.7□□□□□ -0.86
Trim41Q5NCC3 AC145736.2-201ENSMUST00000216305 365 ntBASIC9.7□□□□□ -0.86
Trim41Q5NCC3 AC158803.1-201ENSMUST00000219495 316 ntBASIC9.7□□□□□ -0.86
Trim41Q5NCC3 AC124420.1-201ENSMUST00000219779 791 ntBASIC9.7□□□□□ -0.86
Trim41Q5NCC3 CT572985.2-201ENSMUST00000220496 211 ntBASIC9.7□□□□□ -0.86
Trim41Q5NCC3 AC238676.3-201ENSMUST00000223042 154 ntBASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 LOC102637012-201ENSMUST00000217248 2562 ntBASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Gm23839-201ENSMUST00000116957 109 ntBASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Gm13046-201ENSMUST00000117391 501 ntBASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Gm13122-201ENSMUST00000118380 453 ntBASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Gm13518-201ENSMUST00000120018 233 ntBASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Gm26362-201ENSMUST00000158865 315 ntBASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Gm37076-201ENSMUST00000192033 2294 ntBASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Igkv15-102-201ENSMUST00000197885 287 ntBASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Gm42598-201ENSMUST00000200110 2437 ntBASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Gm45730-201ENSMUST00000212560 395 ntBASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 AC154358.1-201ENSMUST00000224871 218 ntBASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trim41Q5NCC3 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Gm15088-201ENSMUST00000117973 1508 ntBASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Gm15098-201ENSMUST00000119036 1508 ntBASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 AC131687.1-201ENSMUST00000225931 5446 ntBASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Gm22899-201ENSMUST00000104540 131 ntBASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Gm12137-201ENSMUST00000119565 346 ntBASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Gm13213-201ENSMUST00000119668 474 ntBASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Mir6355-201ENSMUST00000183687 106 ntBASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Gm29192-201ENSMUST00000190942 377 ntBASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Gm45313-201ENSMUST00000210584 178 ntBASIC9.68□□□□□ -0.86
Trim41Q5NCC3 AC168881.1-201ENSMUST00000226018 430 ntBASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Gm7988-201ENSMUST00000196623 2297 ntBASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Trim41Q5NCC3 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim41Q5NCC3 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm23744-201ENSMUST00000104231 149 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 127.8 ms