Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm23602-201ENSMUST00000157258 132 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm27445-201ENSMUST00000184484 72 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm28655-201ENSMUST00000191538 692 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm38234-201ENSMUST00000195204 421 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm44355-201ENSMUST00000200417 104 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm3189-201ENSMUST00000205595 832 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm7380-201ENSMUST00000211599 466 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm5917-201ENSMUST00000217638 721 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm26075-201ENSMUST00000104062 121 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm12226-201ENSMUST00000144172 876 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm4725-201ENSMUST00000151048 587 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm24505-201ENSMUST00000157682 126 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm23666-201ENSMUST00000158053 116 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm27952-201ENSMUST00000184748 105 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm9775-201ENSMUST00000189402 331 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm42832-201ENSMUST00000196361 745 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm5309-201ENSMUST00000197416 677 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm19243-201ENSMUST00000198592 269 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm45474-201ENSMUST00000209471 408 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm25592-201ENSMUST00000082635 131 ntBASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Upf3bQ3ULL6 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm23063-201ENSMUST00000102350 93 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm14890-201ENSMUST00000117660 676 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm5762-201ENSMUST00000119204 258 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm14570-201ENSMUST00000119444 391 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm16471-201ENSMUST00000121940 618 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm16101-201ENSMUST00000160695 430 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Mir3473a-201ENSMUST00000175011 78 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Mir6907-201ENSMUST00000183764 71 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm3454-201ENSMUST00000185571 412 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm29815-201ENSMUST00000202418 178 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm18507-201ENSMUST00000218855 525 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Upf3bQ3ULL6 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
Upf3bQ3ULL6 Gm11913-201ENSMUST00000119094 336 ntBASIC3.77□□□□□ -1.81
Upf3bQ3ULL6 Gm6584-201ENSMUST00000119671 447 ntBASIC3.77□□□□□ -1.81
Upf3bQ3ULL6 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.77□□□□□ -1.81
Upf3bQ3ULL6 Gm23755-201ENSMUST00000157578 343 ntBASIC3.77□□□□□ -1.81
Upf3bQ3ULL6 Gm25432-201ENSMUST00000158284 66 ntBASIC3.77□□□□□ -1.81
Upf3bQ3ULL6 Gm23775-201ENSMUST00000158991 249 ntBASIC3.77□□□□□ -1.81
Upf3bQ3ULL6 Gm8224-201ENSMUST00000166178 497 ntBASIC3.77□□□□□ -1.81
Upf3bQ3ULL6 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.77□□□□□ -1.81
Upf3bQ3ULL6 Gm5527-201ENSMUST00000179821 642 ntBASIC3.77□□□□□ -1.81
Upf3bQ3ULL6 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.77□□□□□ -1.81
Upf3bQ3ULL6 Gm27315-201ENSMUST00000183977 154 ntBASIC3.77□□□□□ -1.81
Upf3bQ3ULL6 Gm19637-201ENSMUST00000185933 579 ntBASIC3.77□□□□□ -1.81
Upf3bQ3ULL6 Gm6947-201ENSMUST00000186254 78 ntBASIC3.77□□□□□ -1.81
Upf3bQ3ULL6 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.77□□□□□ -1.81
Upf3bQ3ULL6 Gm28148-201ENSMUST00000186924 697 ntBASIC3.77□□□□□ -1.81
Upf3bQ3ULL6 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms