Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 CT025689.3-201ENSMUST00000223817 301 ntBASIC6.16□□□□□ -1.42
Col9a1Q05722 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC6.16□□□□□ -1.42
Col9a1Q05722 Gm23625-201ENSMUST00000082457 100 ntBASIC6.16□□□□□ -1.42
Col9a1Q05722 Gm26456-201ENSMUST00000082831 111 ntBASIC6.16□□□□□ -1.42
Col9a1Q05722 Gm26066-201ENSMUST00000083385 109 ntBASIC6.16□□□□□ -1.42
Col9a1Q05722 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col9a1Q05722 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col9a1Q05722 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col9a1Q05722 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col9a1Q05722 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col9a1Q05722 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Col9a1Q05722 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col9a1Q05722 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col9a1Q05722 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col9a1Q05722 Gm44021-201ENSMUST00000203055 3516 ntBASIC6.16□□□□□ -1.42
Col9a1Q05722 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col9a1Q05722 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.16□□□□□ -1.42
Col9a1Q05722 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.16□□□□□ -1.42
Col9a1Q05722 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Col9a1Q05722 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col9a1Q05722 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col9a1Q05722 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Col9a1Q05722 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col9a1Q05722 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col9a1Q05722 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col9a1Q05722 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col9a1Q05722 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col9a1Q05722 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col9a1Q05722 Gm43681-201ENSMUST00000201581 1903 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.15□□□□□ -1.42
Col9a1Q05722 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col9a1Q05722 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.15□□□□□ -1.42
Col9a1Q05722 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Col9a1Q05722 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col9a1Q05722 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col9a1Q05722 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col9a1Q05722 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Col9a1Q05722 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Col9a1Q05722 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col9a1Q05722 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col9a1Q05722 Gm15151-201ENSMUST00000117106 177 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 Gm12328-201ENSMUST00000118611 197 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col9a1Q05722 Gm11447-201ENSMUST00000118983 858 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col9a1Q05722 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col9a1Q05722 Mir6539-201ENSMUST00000183732 110 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 Gm28304-201ENSMUST00000185977 312 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC6.15□□□□□ -1.42
Col9a1Q05722 Gm29256-201ENSMUST00000189094 312 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 Gm28484-201ENSMUST00000190606 312 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC6.15□□□□□ -1.42
Col9a1Q05722 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 Ear-ps9-202ENSMUST00000226796 245 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 AC158395.1-201ENSMUST00000227206 452 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col9a1Q05722 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.15□□□□□ -1.42
Col9a1Q05722 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.15□□□□□ -1.42
Col9a1Q05722 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col9a1Q05722 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col9a1Q05722 Gm37363-201ENSMUST00000192336 2233 ntBASIC6.15□□□□□ -1.43
Col9a1Q05722 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col9a1Q05722 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col9a1Q05722 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col9a1Q05722 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col9a1Q05722 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col9a1Q05722 Gm6786-201ENSMUST00000203165 1915 ntBASIC6.15□□□□□ -1.43
Col9a1Q05722 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col9a1Q05722 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col9a1Q05722 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.15□□□□□ -1.43
Col9a1Q05722 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col9a1Q05722 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Col9a1Q05722 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm45537-201ENSMUST00000211539 2708 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Col9a1Q05722 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col9a1Q05722 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col9a1Q05722 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col9a1Q05722 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.14□□□□□ -1.43
Col9a1Q05722 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col9a1Q05722 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col9a1Q05722 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col9a1Q05722 AC122382.2-201ENSMUST00000225128 3602 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col9a1Q05722 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col9a1Q05722 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col9a1Q05722 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm24117-201ENSMUST00000103973 133 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm26291-201ENSMUST00000158889 137 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm23632-201ENSMUST00000175289 125 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm25748-201ENSMUST00000175487 70 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm22118-201ENSMUST00000175593 171 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm29484-201ENSMUST00000186067 324 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm45739-201ENSMUST00000213094 388 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms