Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Msx2Q03358 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msx2Q03358 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msx2Q03358 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Msx2Q03358 Gm23311-201ENSMUST00000104152 134 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm23593-201ENSMUST00000104309 120 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm26144-201ENSMUST00000104475 132 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm13510-201ENSMUST00000118659 429 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm12303-201ENSMUST00000119506 673 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm12739-201ENSMUST00000119769 382 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm2005-201ENSMUST00000120759 542 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm11852-201ENSMUST00000120806 222 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm23538-201ENSMUST00000157535 101 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm24186-201ENSMUST00000157983 127 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm23995-201ENSMUST00000158060 129 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm8207-201ENSMUST00000171204 502 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msx2Q03358 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Msx2Q03358 Gm14527-201ENSMUST00000179300 639 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Msx2Q03358 Gm27699-201ENSMUST00000183553 180 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC5.05□□□□□ -1.6
Msx2Q03358 Gm18117-201ENSMUST00000187720 742 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm28724-202ENSMUST00000194218 295 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm43919-201ENSMUST00000204303 364 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.05□□□□□ -1.6
Msx2Q03358 Gm4083-201ENSMUST00000207158 451 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.05□□□□□ -1.6
Msx2Q03358 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Msx2Q03358 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm45735-201ENSMUST00000212779 319 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 AC153506.2-201ENSMUST00000218051 257 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.05□□□□□ -1.6
Msx2Q03358 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 AC158982.2-201ENSMUST00000226283 184 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 AC131029.2-202ENSMUST00000228430 496 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm22684-201ENSMUST00000082849 132 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msx2Q03358 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Msx2Q03358 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Msx2Q03358 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Msx2Q03358 Gm14390-201ENSMUST00000117505 1695 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Msx2Q03358 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.05□□□□□ -1.6
Msx2Q03358 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Msx2Q03358 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
Msx2Q03358 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Msx2Q03358 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Msx2Q03358 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Msx2Q03358 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Msx2Q03358 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Msx2Q03358 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Msx2Q03358 Gm24338-201ENSMUST00000104205 127 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msx2Q03358 Gm11409-201ENSMUST00000118621 403 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Gm6797-201ENSMUST00000119440 512 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Gm8761-201ENSMUST00000121507 955 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Gm12618-201ENSMUST00000121754 483 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Gm23430-201ENSMUST00000122490 314 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.04□□□□□ -1.6
Msx2Q03358 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.04□□□□□ -1.6
Msx2Q03358 Gm20415-201ENSMUST00000172877 423 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Msx2Q03358 Gm21856-201ENSMUST00000187547 696 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Gm29196-201ENSMUST00000189239 618 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.04□□□□□ -1.6
Msx2Q03358 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Msx2Q03358 Gm43710-201ENSMUST00000199583 452 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Gm44239-201ENSMUST00000204228 271 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC5.04□□□□□ -1.6
Msx2Q03358 Gm18488-201ENSMUST00000215082 364 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 AC170600.1-201ENSMUST00000228763 277 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Msx2Q03358 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Msx2Q03358 Snord68-201ENSMUST00000082516 86 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Gm22508-201ENSMUST00000082772 110 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msx2Q03358 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msx2Q03358 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Msx2Q03358 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Msx2Q03358 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Msx2Q03358 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msx2Q03358 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Msx2Q03358 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msx2Q03358 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Msx2Q03358 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.04□□□□□ -1.6
Msx2Q03358 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms