Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Mir7074-201ENSMUST00000183884 63 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm27402-201ENSMUST00000183890 120 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm10105-201ENSMUST00000184601 270 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm18427-201ENSMUST00000195422 515 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm42758-201ENSMUST00000202146 283 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm45048-201ENSMUST00000207058 429 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm44870-201ENSMUST00000207291 357 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm17990-201ENSMUST00000211728 553 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC4.54□□□□□ -1.68
Col8a1Q00780 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.54□□□□□ -1.68
Col8a1Q00780 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm24446-201ENSMUST00000083982 156 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm4017-201ENSMUST00000084813 338 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm6177-201ENSMUST00000085589 465 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm43718-201ENSMUST00000197524 1857 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col8a1Q00780 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm44678-201ENSMUST00000207828 2775 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col8a1Q00780 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col8a1Q00780 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col8a1Q00780 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm24338-201ENSMUST00000104205 127 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm11633-201ENSMUST00000118176 444 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm11227-201ENSMUST00000119774 471 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm14655-201ENSMUST00000120124 578 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm16100-201ENSMUST00000120489 231 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm14980-201ENSMUST00000121247 736 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm14804-201ENSMUST00000122322 508 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm23214-201ENSMUST00000122716 157 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm26098-201ENSMUST00000157247 288 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm24188-201ENSMUST00000157980 108 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm23023-201ENSMUST00000158767 109 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm16114-201ENSMUST00000161930 300 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm3531-201ENSMUST00000162698 489 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm26177-201ENSMUST00000178683 107 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm10784-201ENSMUST00000178715 238 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm28390-201ENSMUST00000185212 700 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm28995-201ENSMUST00000186625 261 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Stk-ps2-204ENSMUST00000187808 616 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm38167-201ENSMUST00000195704 1178 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm42832-201ENSMUST00000196361 745 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm44125-201ENSMUST00000203068 448 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm44108-201ENSMUST00000203525 422 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm44307-201ENSMUST00000204466 764 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm44611-201ENSMUST00000207507 355 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 AC154521.1-201ENSMUST00000222635 330 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 CT025689.4-201ENSMUST00000225926 601 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm23511-201ENSMUST00000083084 164 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm24928-201ENSMUST00000083399 107 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm25897-201ENSMUST00000083709 107 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 CT030159.1-201ENSMUST00000221580 2261 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col8a1Q00780 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Col8a1Q00780 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.53□□□□□ -1.68
Col8a1Q00780 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
Col8a1Q00780 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
Col8a1Q00780 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col8a1Q00780 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col8a1Q00780 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col8a1Q00780 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col8a1Q00780 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm24350-201ENSMUST00000104163 133 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Mir883a-201ENSMUST00000104824 76 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms