Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm27013-202ENSMUST00000205067 1436 ntBASIC4.27□□□□□ -1.73
NcanP55066 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
NcanP55066 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.27□□□□□ -1.73
NcanP55066 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NcanP55066 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NcanP55066 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.27□□□□□ -1.73
NcanP55066 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NcanP55066 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.26□□□□□ -1.73
NcanP55066 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.26□□□□□ -1.73
NcanP55066 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.26□□□□□ -1.73
NcanP55066 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
NcanP55066 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.26□□□□□ -1.73
NcanP55066 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NcanP55066 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NcanP55066 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NcanP55066 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
NcanP55066 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC4.26□□□□□ -1.73
NcanP55066 Gm7308-201ENSMUST00000121087 447 ntBASIC4.26□□□□□ -1.73
NcanP55066 Gm16471-201ENSMUST00000121940 618 ntBASIC4.26□□□□□ -1.73
NcanP55066 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.26□□□□□ -1.73
NcanP55066 Gm16129-201ENSMUST00000152628 486 ntBASIC4.26□□□□□ -1.73
NcanP55066 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NcanP55066 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.26□□□□□ -1.73
NcanP55066 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.26□□□□□ -1.73
NcanP55066 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
NcanP55066 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
NcanP55066 Gm36985-201ENSMUST00000195595 379 ntBASIC4.26□□□□□ -1.73
NcanP55066 Gm6240-201ENSMUST00000208014 473 ntBASIC4.26□□□□□ -1.73
NcanP55066 Gm45696-201ENSMUST00000212088 985 ntBASIC4.26□□□□□ -1.73
NcanP55066 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.26□□□□□ -1.73
NcanP55066 AC159476.2-201ENSMUST00000216221 418 ntBASIC4.26□□□□□ -1.73
NcanP55066 Gm6841-201ENSMUST00000220602 598 ntBASIC4.26□□□□□ -1.73
NcanP55066 AC107663.3-201ENSMUST00000225873 601 ntBASIC4.26□□□□□ -1.73
NcanP55066 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NcanP55066 Gm9765-201ENSMUST00000043170 321 ntBASIC4.26□□□□□ -1.73
NcanP55066 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NcanP55066 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NcanP55066 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NcanP55066 Gm7204-201ENSMUST00000062591 600 ntBASIC4.26□□□□□ -1.73
NcanP55066 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NcanP55066 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NcanP55066 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NcanP55066 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
NcanP55066 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.26□□□□□ -1.73
NcanP55066 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NcanP55066 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.26□□□□□ -1.73
NcanP55066 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NcanP55066 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NcanP55066 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NcanP55066 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.25□□□□□ -1.73
NcanP55066 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NcanP55066 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NcanP55066 Gm23746-201ENSMUST00000104229 125 ntBASIC4.25□□□□□ -1.73
NcanP55066 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Gm12564-201ENSMUST00000119860 321 ntBASIC4.25□□□□□ -1.73
NcanP55066 Gm13059-201ENSMUST00000119881 398 ntBASIC4.25□□□□□ -1.73
NcanP55066 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Gm15267-201ENSMUST00000120888 464 ntBASIC4.25□□□□□ -1.73
NcanP55066 Gm14800-201ENSMUST00000122084 1272 ntBASIC4.25□□□□□ -1.73
NcanP55066 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.25□□□□□ -1.73
NcanP55066 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Gm23602-201ENSMUST00000157258 132 ntBASIC4.25□□□□□ -1.73
NcanP55066 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Gm28191-201ENSMUST00000189112 211 ntBASIC4.25□□□□□ -1.73
NcanP55066 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Gm44300-201ENSMUST00000196792 121 ntBASIC4.25□□□□□ -1.73
NcanP55066 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Gm44261-201ENSMUST00000203337 209 ntBASIC4.25□□□□□ -1.73
NcanP55066 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.25□□□□□ -1.73
NcanP55066 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Gm9373-201ENSMUST00000208724 599 ntBASIC4.25□□□□□ -1.73
NcanP55066 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC4.25□□□□□ -1.73
NcanP55066 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NcanP55066 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NcanP55066 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NcanP55066 Gm24319-201ENSMUST00000083389 107 ntBASIC4.25□□□□□ -1.73
NcanP55066 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NcanP55066 Gm10161-201ENSMUST00000091506 204 ntBASIC4.25□□□□□ -1.73
NcanP55066 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NcanP55066 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
NcanP55066 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NcanP55066 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NcanP55066 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.24□□□□□ -1.73
NcanP55066 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NcanP55066 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NcanP55066 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NcanP55066 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
NcanP55066 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NcanP55066 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
NcanP55066 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NcanP55066 Gm25313-201ENSMUST00000101817 116 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms