Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Sox3P53784 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Sox3P53784 Gm4736-201ENSMUST00000100870 380 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm23226-201ENSMUST00000116927 103 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm25806-201ENSMUST00000122782 122 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm16359-201ENSMUST00000124511 289 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm11281-201ENSMUST00000141391 576 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm25971-201ENSMUST00000158953 286 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm8807-201ENSMUST00000179328 492 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Sox3P53784 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.69□□□□□ -1.82
Sox3P53784 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Mir7081-201ENSMUST00000184490 75 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm3496-201ENSMUST00000188283 745 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm28920-201ENSMUST00000189957 699 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm28872-201ENSMUST00000191518 158 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm38080-201ENSMUST00000194035 268 ntBASIC3.69□□□□□ -1.82
Sox3P53784 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm44371-201ENSMUST00000204148 467 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm17987-201ENSMUST00000206902 603 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm18645-202ENSMUST00000212222 760 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC3.69□□□□□ -1.82
Sox3P53784 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.69□□□□□ -1.82
Sox3P53784 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.69□□□□□ -1.82
Sox3P53784 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Sox3P53784 Gm26064-201ENSMUST00000083381 109 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Sox3P53784 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Sox3P53784 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Sox3P53784 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Sox3P53784 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Sox3P53784 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
Sox3P53784 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Sox3P53784 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.68□□□□□ -1.82
Sox3P53784 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sox3P53784 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sox3P53784 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sox3P53784 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Sox3P53784 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.68□□□□□ -1.82
Sox3P53784 Gm3835-201ENSMUST00000120752 403 ntBASIC3.68□□□□□ -1.82
Sox3P53784 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.68□□□□□ -1.82
Sox3P53784 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Sox3P53784 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.68□□□□□ -1.82
Sox3P53784 Gm19427-201ENSMUST00000183619 208 ntBASIC3.68□□□□□ -1.82
Sox3P53784 Gm29045-201ENSMUST00000187278 698 ntBASIC3.68□□□□□ -1.82
Sox3P53784 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.68□□□□□ -1.82
Sox3P53784 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.68□□□□□ -1.82
Sox3P53784 Gm42593-201ENSMUST00000198469 377 ntBASIC3.68□□□□□ -1.82
Sox3P53784 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.68□□□□□ -1.82
Sox3P53784 Gm6590-201ENSMUST00000203343 687 ntBASIC3.68□□□□□ -1.82
Sox3P53784 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.68□□□□□ -1.82
Sox3P53784 Gm44857-201ENSMUST00000208331 196 ntBASIC3.68□□□□□ -1.82
Sox3P53784 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.68□□□□□ -1.82
Sox3P53784 Gm45420-201ENSMUST00000211243 425 ntBASIC3.68□□□□□ -1.82
Sox3P53784 Gm36247-201ENSMUST00000211834 285 ntBASIC3.68□□□□□ -1.82
Sox3P53784 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.68□□□□□ -1.82
Sox3P53784 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.68□□□□□ -1.82
Sox3P53784 AC130547.1-201ENSMUST00000228079 1047 ntBASIC3.68□□□□□ -1.82
Sox3P53784 Gm12582-201ENSMUST00000030555 697 ntBASIC3.68□□□□□ -1.82
Sox3P53784 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Sox3P53784 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Sox3P53784 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Sox3P53784 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Sox3P53784 Gm7381-201ENSMUST00000098958 300 ntBASIC3.68□□□□□ -1.82
Sox3P53784 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.68□□□□□ -1.82
Sox3P53784 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Sox3P53784 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Sox3P53784 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sox3P53784 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Sox3P53784 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Sox3P53784 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Sox3P53784 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Sox3P53784 Gm23231-201ENSMUST00000157299 104 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Gm23326-201ENSMUST00000157419 105 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Gm25185-201ENSMUST00000157754 96 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Mir1934-201ENSMUST00000158127 83 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Gm22135-201ENSMUST00000158752 108 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Gm22398-201ENSMUST00000174941 125 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Gm25731-201ENSMUST00000175167 125 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Gm25598-201ENSMUST00000179031 107 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Gm27025-201ENSMUST00000182392 942 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Gm28788-201ENSMUST00000189717 375 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Gm29558-201ENSMUST00000190134 375 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Gm28500-201ENSMUST00000190286 151 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Gm17966-201ENSMUST00000193453 594 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Gm38088-201ENSMUST00000195829 241 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Gm43841-201ENSMUST00000199491 586 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
Sox3P53784 Gm45080-201ENSMUST00000206648 283 ntBASIC3.67□□□□□ -1.82
Sox3P53784 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.67□□□□□ -1.82
Sox3P53784 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Sox3P53784 Gm7639-201ENSMUST00000212608 484 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms