Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sox1P53783 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Sox1P53783 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sox1P53783 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Sox1P53783 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox1P53783 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Sox1P53783 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Sox1P53783 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Sox1P53783 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
Sox1P53783 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sox1P53783 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sox1P53783 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sox1P53783 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sox1P53783 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Sox1P53783 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sox1P53783 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.51□□□□□ -1.53
Sox1P53783 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sox1P53783 Gm22758-201ENSMUST00000102275 96 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm24079-201ENSMUST00000104352 132 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm25565-201ENSMUST00000104605 105 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm23839-201ENSMUST00000116957 109 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm12285-201ENSMUST00000117347 233 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm15025-201ENSMUST00000118434 418 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm13510-201ENSMUST00000118659 429 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm12787-201ENSMUST00000119234 396 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm6884-201ENSMUST00000119318 615 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm12231-201ENSMUST00000119447 695 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm6584-201ENSMUST00000119671 447 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC5.51□□□□□ -1.53
Sox1P53783 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC5.51□□□□□ -1.53
Sox1P53783 Gm24113-201ENSMUST00000157477 276 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm24961-201ENSMUST00000157918 184 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm26034-201ENSMUST00000158154 116 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm28257-201ENSMUST00000185244 463 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sox1P53783 Gm37167-201ENSMUST00000194946 396 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm43309-201ENSMUST00000200837 458 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm5027-201ENSMUST00000206700 375 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Olfr151-202ENSMUST00000221099 929 ntBASIC5.51□□□□□ -1.53
Sox1P53783 AC158142.1-201ENSMUST00000226721 416 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm23460-201ENSMUST00000083258 109 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sox1P53783 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Sox1P53783 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sox1P53783 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sox1P53783 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sox1P53783 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sox1P53783 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sox1P53783 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.51□□□□□ -1.53
Sox1P53783 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sox1P53783 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sox1P53783 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Sox1P53783 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sox1P53783 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sox1P53783 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sox1P53783 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sox1P53783 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sox1P53783 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sox1P53783 Mir297a-2-201ENSMUST00000103795 90 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Gm11577-201ENSMUST00000118030 737 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Gm14688-201ENSMUST00000119169 303 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC5.5□□□□□ -1.53
Sox1P53783 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC5.5□□□□□ -1.53
Sox1P53783 Gm22791-201ENSMUST00000157232 145 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Gm24965-201ENSMUST00000157922 106 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.5□□□□□ -1.53
Sox1P53783 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sox1P53783 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sox1P53783 Gm24415-201ENSMUST00000180218 107 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Mir7685-201ENSMUST00000183555 62 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Gm27385-201ENSMUST00000184747 104 ntBASIC5.5□□□□□ -1.53
Sox1P53783 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
Sox1P53783 Gm44858-201ENSMUST00000207360 154 ntBASIC5.5□□□□□ -1.53
Sox1P53783 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.5□□□□□ -1.53
Sox1P53783 AC153506.2-201ENSMUST00000218051 257 ntBASIC5.5□□□□□ -1.53
Sox1P53783 AC164567.2-201ENSMUST00000219363 445 ntBASIC5.5□□□□□ -1.53
Sox1P53783 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sox1P53783 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sox1P53783 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sox1P53783 Gm23928-201ENSMUST00000082469 145 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Gm25401-201ENSMUST00000082975 106 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sox1P53783 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sox1P53783 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sox1P53783 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.5□□□□□ -1.53
Sox1P53783 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
Sox1P53783 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sox1P53783 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox1P53783 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox1P53783 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms