Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Shmt1P50431 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Shmt1P50431 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Shmt1P50431 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Shmt1P50431 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Shmt1P50431 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.97□□□□□ -1.61
Shmt1P50431 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Shmt1P50431 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.97□□□□□ -1.61
Shmt1P50431 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Shmt1P50431 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.61
Shmt1P50431 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Shmt1P50431 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Shmt1P50431 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Shmt1P50431 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm15981-201ENSMUST00000119196 457 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm14876-201ENSMUST00000120795 327 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Shmt1P50431 Gm12893-201ENSMUST00000121732 275 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Shmt1P50431 Gm22491-201ENSMUST00000157190 102 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm22277-201ENSMUST00000157204 277 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm2343-201ENSMUST00000161177 1042 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm22177-201ENSMUST00000175002 158 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.96□□□□□ -1.62
Shmt1P50431 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.96□□□□□ -1.62
Shmt1P50431 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.96□□□□□ -1.62
Shmt1P50431 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.96□□□□□ -1.62
Shmt1P50431 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm42924-201ENSMUST00000197261 185 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm5983-201ENSMUST00000197739 770 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm45063-201ENSMUST00000203726 472 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm45032-201ENSMUST00000205375 520 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm44634-201ENSMUST00000206119 152 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm45857-201ENSMUST00000212207 356 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm18487-201ENSMUST00000215826 878 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 AC153924.1-201ENSMUST00000220117 312 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm19786-201ENSMUST00000222589 580 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 AC116656.1-201ENSMUST00000227040 755 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Shmt1P50431 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Shmt1P50431 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Shmt1P50431 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Shmt1P50431 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Shmt1P50431 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
Shmt1P50431 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Shmt1P50431 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.96□□□□□ -1.62
Shmt1P50431 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.96□□□□□ -1.62
Shmt1P50431 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Shmt1P50431 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
Shmt1P50431 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
Shmt1P50431 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Shmt1P50431 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Shmt1P50431 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Shmt1P50431 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Shmt1P50431 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Shmt1P50431 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Shmt1P50431 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Shmt1P50431 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Shmt1P50431 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Shmt1P50431 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Shmt1P50431 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Shmt1P50431 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Shmt1P50431 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.95□□□□□ -1.62
Shmt1P50431 Gm12112-201ENSMUST00000117772 231 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 Gm14918-201ENSMUST00000118153 268 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 Zakit-201ENSMUST00000157677 308 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Shmt1P50431 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Shmt1P50431 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Shmt1P50431 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Shmt1P50431 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Shmt1P50431 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Shmt1P50431 Gm27599-201ENSMUST00000183758 174 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 Gm4557-201ENSMUST00000185826 907 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 Gm4526-201ENSMUST00000186039 920 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 Gm8708-201ENSMUST00000188500 906 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Shmt1P50431 Gm28843-201ENSMUST00000189198 678 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC4.95□□□□□ -1.62
Shmt1P50431 Gm29546-201ENSMUST00000191171 678 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.95□□□□□ -1.62
Shmt1P50431 Gm8069-201ENSMUST00000197887 154 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 Gm5284-201ENSMUST00000199053 903 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 Gm43513-201ENSMUST00000199779 1076 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 Gm42896-201ENSMUST00000201249 1113 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 Gm7039-201ENSMUST00000205138 346 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.95□□□□□ -1.62
Shmt1P50431 Gm45427-201ENSMUST00000209572 1253 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 AC101677.1-201ENSMUST00000218590 158 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 AC116460.1-201ENSMUST00000219040 313 ntBASIC4.95□□□□□ -1.62
Shmt1P50431 AC192333.1-201ENSMUST00000224573 376 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms