Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.39□□□□□ -1.87
HttP42859 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HttP42859 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.39□□□□□ -1.87
HttP42859 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HttP42859 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.39□□□□□ -1.87
HttP42859 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC3.39□□□□□ -1.87
HttP42859 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.39□□□□□ -1.87
HttP42859 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.39□□□□□ -1.87
HttP42859 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.39□□□□□ -1.87
HttP42859 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC3.39□□□□□ -1.87
HttP42859 Gm25280-201ENSMUST00000157269 101 ntBASIC3.39□□□□□ -1.87
HttP42859 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HttP42859 Gm23847-201ENSMUST00000083829 110 ntBASIC3.39□□□□□ -1.87
HttP42859 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HttP42859 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC3.39□□□□□ -1.87
HttP42859 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.39□□□□□ -1.87
HttP42859 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC3.39□□□□□ -1.87
HttP42859 Gm37504-201ENSMUST00000192537 2374 ntBASIC3.39□□□□□ -1.87
HttP42859 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HttP42859 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
HttP42859 Gm10723-201ENSMUST00000195366 6918 ntBASIC3.39□□□□□ -1.87
HttP42859 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HttP42859 AC160931.3-201ENSMUST00000222111 2267 ntBASIC3.39□□□□□ -1.87
HttP42859 Gm13438-201ENSMUST00000120100 573 ntBASIC3.39□□□□□ -1.87
HttP42859 Gm15786-201ENSMUST00000121079 450 ntBASIC3.39□□□□□ -1.87
HttP42859 Gm22500-201ENSMUST00000158982 99 ntBASIC3.39□□□□□ -1.87
HttP42859 Gm6075-201ENSMUST00000186816 486 ntBASIC3.39□□□□□ -1.87
HttP42859 Gm9762-201ENSMUST00000036976 444 ntBASIC3.39□□□□□ -1.87
HttP42859 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
HttP42859 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.38□□□□□ -1.87
HttP42859 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HttP42859 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HttP42859 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HttP42859 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HttP42859 Gm13664-201ENSMUST00000117304 345 ntBASIC3.38□□□□□ -1.87
HttP42859 Gm11448-201ENSMUST00000120427 450 ntBASIC3.38□□□□□ -1.87
HttP42859 Gm22073-201ENSMUST00000122668 189 ntBASIC3.38□□□□□ -1.87
HttP42859 Gm36985-201ENSMUST00000195595 379 ntBASIC3.38□□□□□ -1.87
HttP42859 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC3.38□□□□□ -1.87
HttP42859 Gm19126-201ENSMUST00000207896 509 ntBASIC3.38□□□□□ -1.87
HttP42859 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.38□□□□□ -1.87
HttP42859 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HttP42859 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HttP42859 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
HttP42859 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HttP42859 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.38□□□□□ -1.87
HttP42859 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
HttP42859 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HttP42859 Gm12578-201ENSMUST00000121244 417 ntBASIC3.38□□□□□ -1.87
HttP42859 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HttP42859 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HttP42859 Gm27379-201ENSMUST00000183730 123 ntBASIC3.38□□□□□ -1.87
HttP42859 Gm8282-201ENSMUST00000187559 483 ntBASIC3.38□□□□□ -1.87
HttP42859 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.38□□□□□ -1.87
HttP42859 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HttP42859 Gm13615-201ENSMUST00000120242 1612 ntBASIC3.38□□□□□ -1.87
HttP42859 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HttP42859 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC3.38□□□□□ -1.87
HttP42859 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
HttP42859 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HttP42859 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HttP42859 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HttP42859 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC3.37□□□□□ -1.87
HttP42859 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
HttP42859 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HttP42859 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HttP42859 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.37□□□□□ -1.87
HttP42859 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.37□□□□□ -1.87
HttP42859 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.37□□□□□ -1.87
HttP42859 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HttP42859 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.37□□□□□ -1.87
HttP42859 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC3.37□□□□□ -1.87
HttP42859 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC3.37□□□□□ -1.87
HttP42859 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HttP42859 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HttP42859 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HttP42859 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.37□□□□□ -1.87
HttP42859 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HttP42859 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HttP42859 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
HttP42859 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.37□□□□□ -1.87
HttP42859 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HttP42859 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.37□□□□□ -1.87
HttP42859 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HttP42859 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HttP42859 Gm24443-201ENSMUST00000157242 132 ntBASIC3.37□□□□□ -1.87
HttP42859 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HttP42859 Gm28785-201ENSMUST00000187478 379 ntBASIC3.37□□□□□ -1.87
HttP42859 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC3.37□□□□□ -1.87
HttP42859 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HttP42859 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HttP42859 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
HttP42859 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HttP42859 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HttP42859 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.36□□□□□ -1.87
HttP42859 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.36□□□□□ -1.87
HttP42859 Gm24898-201ENSMUST00000158133 106 ntBASIC3.36□□□□□ -1.87
HttP42859 Gm20651-201ENSMUST00000177219 329 ntBASIC3.36□□□□□ -1.87
HttP42859 Gm28924-201ENSMUST00000190012 241 ntBASIC3.36□□□□□ -1.87
HttP42859 Gm2719-201ENSMUST00000191929 444 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms