Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm24525-201ENSMUST00000082917 151 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.12□□□□□ -1.91
Sdc1P18828 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm45697-201ENSMUST00000212893 2876 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Sdc1P18828 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Sdc1P18828 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Sdc1P18828 Gm25919-201ENSMUST00000104271 132 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Sdc1P18828 Mir466j-201ENSMUST00000116876 122 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Gm6079-201ENSMUST00000121356 404 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Gm22106-201ENSMUST00000122544 127 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.11□□□□□ -1.91
Sdc1P18828 Gm24444-201ENSMUST00000157244 308 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Gm23782-201ENSMUST00000157939 120 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Sdc1P18828 Gm20542-201ENSMUST00000174582 372 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Sdc1P18828 Gm26556-201ENSMUST00000180645 320 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Sdc1P18828 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Sdc1P18828 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.11□□□□□ -1.91
Sdc1P18828 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.11□□□□□ -1.91
Sdc1P18828 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.11□□□□□ -1.91
Sdc1P18828 Gm44348-201ENSMUST00000200165 122 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Gm18327-201ENSMUST00000202426 830 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Gm44032-201ENSMUST00000204841 166 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Gm46234-201ENSMUST00000218702 259 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.11□□□□□ -1.91
Sdc1P18828 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Sdc1P18828 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Sdc1P18828 Gm22245-201ENSMUST00000082479 103 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Mir188-201ENSMUST00000083464 68 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
Sdc1P18828 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.11□□□□□ -1.91
Sdc1P18828 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.11□□□□□ -1.91
Sdc1P18828 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Sdc1P18828 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Sdc1P18828 Gm22473-201ENSMUST00000104114 132 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm24831-201ENSMUST00000116778 126 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm11898-201ENSMUST00000117161 385 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm13451-201ENSMUST00000117649 592 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm13213-201ENSMUST00000119668 474 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm14534-201ENSMUST00000120045 357 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm22478-201ENSMUST00000122570 154 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Sdc1P18828 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Sdc1P18828 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Sdc1P18828 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Sdc1P18828 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.1□□□□□ -1.91
Sdc1P18828 Gm23587-201ENSMUST00000157658 84 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm24224-201ENSMUST00000158828 258 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm6374-201ENSMUST00000159051 788 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm3053-201ENSMUST00000161709 616 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm8161-201ENSMUST00000168739 481 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm24520-201ENSMUST00000179510 110 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm25412-201ENSMUST00000180258 107 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm27387-201ENSMUST00000184583 116 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Sdc1P18828 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.1□□□□□ -1.91
Sdc1P18828 Gm20162-201ENSMUST00000193629 871 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm43855-201ENSMUST00000197462 507 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Sdc1P18828 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.1□□□□□ -1.91
Sdc1P18828 Gm4045-201ENSMUST00000204076 310 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm44088-201ENSMUST00000204595 237 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm18320-201ENSMUST00000211304 595 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm16419-201ENSMUST00000221057 625 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.1□□□□□ -1.91
Sdc1P18828 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Sdc1P18828 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Sdc1P18828 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Sdc1P18828 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Sdc1P18828 Gm22304-201ENSMUST00000082688 129 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Mir337-201ENSMUST00000083592 97 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Sdc1P18828 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.1□□□□□ -1.91
Sdc1P18828 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Sdc1P18828 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Sdc1P18828 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Sdc1P18828 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Sdc1P18828 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Sdc1P18828 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Sdc1P18828 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Sdc1P18828 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.09□□□□□ -1.91
Sdc1P18828 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Sdc1P18828 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms