Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Msx1P13297 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Msx1P13297 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Msx1P13297 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Msx1P13297 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Msx1P13297 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Msx1P13297 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.76□□□□□ -1.49
Msx1P13297 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Msx1P13297 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Msx1P13297 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Msx1P13297 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.76□□□□□ -1.49
Msx1P13297 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Msx1P13297 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Msx1P13297 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Msx1P13297 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Msx1P13297 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Msx1P13297 Gm25564-201ENSMUST00000104604 132 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Msx1P13297 Gm22714-201ENSMUST00000116894 78 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Gm15807-201ENSMUST00000119880 1128 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Gm12399-201ENSMUST00000121475 446 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.76□□□□□ -1.49
Msx1P13297 n-R5s80-201ENSMUST00000122596 111 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Gm22345-201ENSMUST00000122644 107 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
Msx1P13297 Gm24060-201ENSMUST00000157494 95 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Gm25013-201ENSMUST00000158402 128 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Scarna6-201ENSMUST00000158656 265 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Gm17183-201ENSMUST00000171170 493 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Msx1P13297 Gm23799-201ENSMUST00000175559 120 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Gm21816-201ENSMUST00000179255 360 ntBASIC5.76□□□□□ -1.49
Msx1P13297 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Gm29479-201ENSMUST00000190352 455 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Gm42665-201ENSMUST00000202100 586 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Msx1P13297 Gm6112-201ENSMUST00000208037 629 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.76□□□□□ -1.49
Msx1P13297 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Msx1P13297 Gm45815-201ENSMUST00000220241 146 ntBASIC5.76□□□□□ -1.49
Msx1P13297 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.76□□□□□ -1.49
Msx1P13297 AC124729.1-201ENSMUST00000225327 976 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Mir471-201ENSMUST00000093596 67 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.76□□□□□ -1.49
Msx1P13297 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Msx1P13297 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Msx1P13297 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Msx1P13297 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Msx1P13297 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Msx1P13297 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Msx1P13297 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Msx1P13297 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Msx1P13297 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Msx1P13297 Gm13329-201ENSMUST00000117063 265 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Gm11698-201ENSMUST00000117948 455 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Gm16032-201ENSMUST00000118534 168 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Gm12156-201ENSMUST00000119188 554 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Gm13818-201ENSMUST00000119441 511 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Gm16423-201ENSMUST00000120078 947 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Gm11430-201ENSMUST00000121317 217 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.75□□□□□ -1.49
Msx1P13297 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.75□□□□□ -1.49
Msx1P13297 Gm22724-201ENSMUST00000158091 127 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.75□□□□□ -1.49
Msx1P13297 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Gm28467-201ENSMUST00000190981 318 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Gm37966-201ENSMUST00000193122 326 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.75□□□□□ -1.49
Msx1P13297 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Gm45405-201ENSMUST00000211544 609 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.75□□□□□ -1.49
Msx1P13297 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Msx1P13297 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Msx1P13297 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.75□□□□□ -1.49
Msx1P13297 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms