Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RaraP11416 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RaraP11416 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RaraP11416 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RaraP11416 Gm24042-201ENSMUST00000083114 103 ntBASIC5.73□□□□□ -1.49
RaraP11416 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RaraP11416 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RaraP11416 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RaraP11416 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.73□□□□□ -1.49
RaraP11416 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
RaraP11416 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.72□□□□□ -1.49
RaraP11416 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.72□□□□□ -1.49
RaraP11416 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.72□□□□□ -1.49
RaraP11416 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RaraP11416 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RaraP11416 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.72□□□□□ -1.49
RaraP11416 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
RaraP11416 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RaraP11416 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.72□□□□□ -1.49
RaraP11416 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.72□□□□□ -1.49
RaraP11416 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RaraP11416 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RaraP11416 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.72□□□□□ -1.49
RaraP11416 Gm8296-201ENSMUST00000185597 524 ntBASIC5.72□□□□□ -1.49
RaraP11416 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC5.72□□□□□ -1.49
RaraP11416 Gm34768-201ENSMUST00000193884 565 ntBASIC5.72□□□□□ -1.49
RaraP11416 Gm37445-201ENSMUST00000195318 242 ntBASIC5.72□□□□□ -1.49
RaraP11416 Gm18551-201ENSMUST00000195594 642 ntBASIC5.72□□□□□ -1.49
RaraP11416 Gm43405-201ENSMUST00000198642 337 ntBASIC5.72□□□□□ -1.49
RaraP11416 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.72□□□□□ -1.49
RaraP11416 Gm45105-201ENSMUST00000207824 397 ntBASIC5.72□□□□□ -1.49
RaraP11416 Gm7675-201ENSMUST00000208828 686 ntBASIC5.72□□□□□ -1.49
RaraP11416 Gm44853-201ENSMUST00000209070 250 ntBASIC5.72□□□□□ -1.49
RaraP11416 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.72□□□□□ -1.49
RaraP11416 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC5.72□□□□□ -1.49
RaraP11416 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RaraP11416 Gm2446-201ENSMUST00000220144 772 ntBASIC5.72□□□□□ -1.49
RaraP11416 AC133076.1-201ENSMUST00000228074 484 ntBASIC5.72□□□□□ -1.49
RaraP11416 AC170600.1-201ENSMUST00000228763 277 ntBASIC5.72□□□□□ -1.49
RaraP11416 Gm22456-201ENSMUST00000082578 125 ntBASIC5.72□□□□□ -1.49
RaraP11416 Gm23508-201ENSMUST00000083079 72 ntBASIC5.72□□□□□ -1.49
RaraP11416 Mir298-201ENSMUST00000083476 82 ntBASIC5.72□□□□□ -1.49
RaraP11416 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RaraP11416 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
RaraP11416 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.72□□□□□ -1.49
RaraP11416 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.72□□□□□ -1.49
RaraP11416 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RaraP11416 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.72□□□□□ -1.49
RaraP11416 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RaraP11416 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
RaraP11416 Gm37064-201ENSMUST00000193851 2231 ntBASIC5.71□□□□□ -1.49
RaraP11416 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RaraP11416 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.71□□□□□ -1.49
RaraP11416 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.71□□□□□ -1.49
RaraP11416 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
RaraP11416 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC5.71□□□□□ -1.5
RaraP11416 Gm15490-201ENSMUST00000119894 387 ntBASIC5.71□□□□□ -1.5
RaraP11416 Gm14563-201ENSMUST00000120571 354 ntBASIC5.71□□□□□ -1.5
RaraP11416 Gm15959-201ENSMUST00000121724 368 ntBASIC5.71□□□□□ -1.5
RaraP11416 Gm13077-201ENSMUST00000121941 484 ntBASIC5.71□□□□□ -1.5
RaraP11416 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.71□□□□□ -1.5
RaraP11416 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RaraP11416 Gm25428-201ENSMUST00000157608 114 ntBASIC5.71□□□□□ -1.5
RaraP11416 Gm25430-201ENSMUST00000157614 289 ntBASIC5.71□□□□□ -1.5
RaraP11416 Gm23964-201ENSMUST00000157966 107 ntBASIC5.71□□□□□ -1.5
RaraP11416 Gm22210-201ENSMUST00000158101 144 ntBASIC5.71□□□□□ -1.5
RaraP11416 Gm23069-201ENSMUST00000158240 311 ntBASIC5.71□□□□□ -1.5
RaraP11416 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.71□□□□□ -1.5
RaraP11416 Gm28353-201ENSMUST00000186482 570 ntBASIC5.71□□□□□ -1.5
RaraP11416 Gm28533-201ENSMUST00000186741 570 ntBASIC5.71□□□□□ -1.5
RaraP11416 Gm38011-201ENSMUST00000193312 279 ntBASIC5.71□□□□□ -1.5
RaraP11416 Gm17954-201ENSMUST00000195893 607 ntBASIC5.71□□□□□ -1.5
RaraP11416 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.71□□□□□ -1.5
RaraP11416 Gm18100-201ENSMUST00000200897 452 ntBASIC5.71□□□□□ -1.5
RaraP11416 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.71□□□□□ -1.5
RaraP11416 Gm17988-201ENSMUST00000208796 535 ntBASIC5.71□□□□□ -1.5
RaraP11416 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC5.71□□□□□ -1.5
RaraP11416 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.71□□□□□ -1.5
RaraP11416 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC5.71□□□□□ -1.5
RaraP11416 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.71□□□□□ -1.5
RaraP11416 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RaraP11416 Gm23456-201ENSMUST00000083335 137 ntBASIC5.71□□□□□ -1.5
RaraP11416 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RaraP11416 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RaraP11416 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RaraP11416 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RaraP11416 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RaraP11416 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RaraP11416 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RaraP11416 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.7□□□□□ -1.5
RaraP11416 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RaraP11416 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RaraP11416 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.7□□□□□ -1.5
RaraP11416 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RaraP11416 Gm18360-201ENSMUST00000173327 1524 ntBASIC5.7□□□□□ -1.5
RaraP11416 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RaraP11416 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.7□□□□□ -1.5
RaraP11416 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RaraP11416 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC5.7□□□□□ -1.5
RaraP11416 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms