Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC3.16□□□□□ -1.9
Col5a1O88207 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col5a1O88207 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col5a1O88207 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Col5a1O88207 Gm11970-201ENSMUST00000116105 320 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm11576-201ENSMUST00000117433 417 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm8475-201ENSMUST00000118211 526 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Col5a1O88207 Gm14389-201ENSMUST00000140453 241 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC3.16□□□□□ -1.9
Col5a1O88207 Gm23671-201ENSMUST00000157472 103 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm27374-201ENSMUST00000183660 81 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm43355-201ENSMUST00000196541 346 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm42758-201ENSMUST00000202146 283 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.16□□□□□ -1.9
Col5a1O88207 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm22043-201ENSMUST00000082993 158 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col5a1O88207 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col5a1O88207 Gm37124-201ENSMUST00000192140 1992 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col5a1O88207 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.15□□□□□ -1.9
Col5a1O88207 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Col5a1O88207 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Col5a1O88207 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Col5a1O88207 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Col5a1O88207 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Col5a1O88207 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Col5a1O88207 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
Col5a1O88207 Gm12677-201ENSMUST00000118668 426 ntBASIC3.15□□□□□ -1.91
Col5a1O88207 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.15□□□□□ -1.91
Col5a1O88207 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.15□□□□□ -1.91
Col5a1O88207 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.15□□□□□ -1.91
Col5a1O88207 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col5a1O88207 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.15□□□□□ -1.91
Col5a1O88207 Gm44399-201ENSMUST00000205043 226 ntBASIC3.15□□□□□ -1.91
Col5a1O88207 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.15□□□□□ -1.91
Col5a1O88207 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.15□□□□□ -1.91
Col5a1O88207 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC3.15□□□□□ -1.91
Col5a1O88207 AC137950.3-201ENSMUST00000228250 246 ntBASIC3.15□□□□□ -1.91
Col5a1O88207 AC154738.4-201ENSMUST00000228310 414 ntBASIC3.15□□□□□ -1.91
Col5a1O88207 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col5a1O88207 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Col5a1O88207 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Col5a1O88207 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col5a1O88207 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Col5a1O88207 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.15□□□□□ -1.91
Col5a1O88207 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Col5a1O88207 Gm11923-201ENSMUST00000118135 508 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC3.14□□□□□ -1.91
Col5a1O88207 Gm25373-201ENSMUST00000158156 115 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Mir7009-201ENSMUST00000184519 64 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Gm28069-201ENSMUST00000189926 214 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Gm28920-201ENSMUST00000189957 699 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Gm8747-201ENSMUST00000195392 751 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Gm34005-201ENSMUST00000215834 282 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC3.14□□□□□ -1.91
Col5a1O88207 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Col5a1O88207 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Col5a1O88207 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC3.14□□□□□ -1.91
Col5a1O88207 Gm42841-201ENSMUST00000199806 1932 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Gm24541-201ENSMUST00000103871 96 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Gm12722-201ENSMUST00000118507 493 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Gm16420-201ENSMUST00000120258 856 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Gm17075-201ENSMUST00000171924 670 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.14□□□□□ -1.91
Col5a1O88207 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.14□□□□□ -1.91
Col5a1O88207 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.14□□□□□ -1.91
Col5a1O88207 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Gm19987-201ENSMUST00000216339 499 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.14□□□□□ -1.91
Col5a1O88207 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Col5a1O88207 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Col5a1O88207 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col5a1O88207 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col5a1O88207 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col5a1O88207 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col5a1O88207 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col5a1O88207 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col5a1O88207 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col5a1O88207 Gm22885-201ENSMUST00000157410 107 ntBASIC3.13□□□□□ -1.91
Col5a1O88207 Gm24780-201ENSMUST00000157635 143 ntBASIC3.13□□□□□ -1.91
Col5a1O88207 Gm26215-201ENSMUST00000158584 139 ntBASIC3.13□□□□□ -1.91
Col5a1O88207 Gm4207-201ENSMUST00000173144 960 ntBASIC3.13□□□□□ -1.91
Col5a1O88207 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.13□□□□□ -1.91
Col5a1O88207 Gm22910-201ENSMUST00000178568 132 ntBASIC3.13□□□□□ -1.91
Col5a1O88207 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.13□□□□□ -1.91
Col5a1O88207 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col5a1O88207 Gm44376-201ENSMUST00000197570 128 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms